Search results
From WormBaseWiki
Jump to navigationJump to searchCreate the page "Raymond" on this wiki! See also the search results found.
- ! raymond2 KB (298 words) - 14:47, 18 June 2013
- Karen, Lincoln, Raymond Raymond, JD, Kevin, Todd, Paul S, Michael P4 KB (689 words) - 11:13, 29 August 2013
- * Raymond - Flybase has experience of moving to a new system. They may be able to adv * Raymond - we check the numbers in our classes.4 KB (645 words) - 08:57, 27 August 2014
- * Raymond: what about large publications like NAR papers? * Raymond: We could use use WBPerson or Analysis objects as appropriate.8 KB (1,246 words) - 15:52, 12 November 2013
- 3. SoBa Graph for NAR paper. Raymond will discuss with Sibyl on how to change the display.1 KB (165 words) - 18:42, 15 August 2019
- Raymond couldn't see a problem but deferred to Kimberly and Juancarlos to look into Raymond volunteered to prepare and circulate a template.3 KB (486 words) - 11:14, 21 December 2011
- *** Stavros and Raymond agreed to be representatives; may ask Todd as website representative1 KB (184 words) - 18:13, 16 February 2023
- * Raymond will write up a Wiki page for documentation * Raymond will pilot this with help docs for the new SObA phenotype graph5 KB (776 words) - 16:50, 7 January 2016
- * Raymond working on display for paper * Raymond, Juancarlos working on7 KB (1,010 words) - 17:08, 4 May 2017
- * Raymond, Valerio (community curation), Wen (Simple mine)787 bytes (115 words) - 04:11, 4 November 2021
- * Raymond : use Ranjana's document to organize talks, review topics, and other things * Todd could do the tools talk, otherwise Raymond could.7 KB (1,113 words) - 18:19, 6 April 2023
- * GitHub ticket 6775 - Raymond will respond * Raymond interested in this issue as well; Scott, Chris, and Raymond will discuss and come up with an automated approach4 KB (575 words) - 18:18, 6 December 2018
- * Raymond & Juancarlos will work on a SObA graph for GO annotations * Raymond and Juancarlos are working on it4 KB (544 words) - 16:22, 5 January 2017
- *Daniela [Karen/Raymond filling in as conference moderator] **Raymond suggests making a division between for-profit or non-profit, Paul S. sugges3 KB (420 words) - 16:02, 17 August 2017
- '''Raymond - is there a policy to deal with questions from students'''1 KB (181 words) - 15:47, 2 November 2017
- * Raymond will try to remember to forward to staff * Daniela, Wen, Valerio, Eduardo, Raymond met with CeNGEN5 KB (777 words) - 13:18, 1 April 2021
- **position_matrix (Raymond) **rearrangment (Raymond, Mary Ann?)7 KB (1,077 words) - 16:26, 20 July 2017
- Raymond: We have only stored the image and final analysis<br> Raymond: One postgres, two data streams one to acedb and a second to alliance<br>4 KB (709 words) - 13:27, 5 April 2021
- * Raymond: we should have a focus to the SAB meeting like collaborative efforts with * Raymond: we should have a focus to the SAB meeting like collaborative efforts with4 KB (684 words) - 19:43, 5 December 2015
- * Raymond: We should try to write so that the content remains pertinent for a while * Karen asked Raymond/Gary and any other person interested in the group to help with pharyngeal p7 KB (1,073 words) - 16:26, 2 March 2017
- Raymond has been working on a prototype. People should try it and give feedback.1 KB (203 words) - 16:53, 16 February 2017
- Raymond * Raymond & Chris - fixed gene interaction table dumping script4 KB (624 words) - 17:15, 4 April 2013
- Raymond - can you know if other people have read the message? Other possibility - LINE (Raymond) - could check to see if someone read it3 KB (477 words) - 16:23, 19 March 2015
- * Raymond encountering challenges with setting up regular meeting room reservations i * Anatomy function project with Raymond3 KB (542 words) - 16:49, 1 July 2021
- *Raymond and Juancarlos working on it *Raymond: Assume that once logged into another machine, your keystrokes could be mon5 KB (752 words) - 17:07, 7 July 2011
- **Raymond will send Paul Davis link to page that describes sequence verification1 KB (205 words) - 16:55, 17 May 2012
- ....html Web Resources for ''C. elegans''] - WormBook's WormMethod chapter by Raymond Lee containing core web resources for ''C. elegans'' research2 KB (284 words) - 22:43, 16 August 2010
- *Raymond setup FTP directory for Wen ***Raymond re-installed WS database4 KB (651 words) - 16:11, 2 May 2013
- * Raymond's LEGO-like approach to curating anatomy function * Raymond (WormBase ontology browser)6 KB (857 words) - 16:01, 2 October 2014
- In the future (thank you, Raymond): Contact Person: Raymond Lee5 KB (746 words) - 18:57, 10 August 2010
- ** Raymond, Chris, Ranjana, Valerio, Daniela, Kimberly * Raymond gets slim terms into Solr from OBO release file; Sibyl collecting from diff5 KB (759 words) - 15:02, 11 September 2019
- * Plans to add annotation searches for GO and AO, then bring in input from Raymond, Ranjana, Kimberly1 KB (150 words) - 16:37, 12 May 2010
- ...sentations/2005.11-SAB-CSHL/RL-2005-SAB-AO.ppt Cells and anatomy ontology, Raymond Lee]2 KB (238 words) - 12:04, 20 January 2011
- * Raymond - are we ready to implement as a widget on person page? * Raymond installing new network card4 KB (646 words) - 17:33, 1 September 2016
- ** Chris Grove, Kimberly Van Auken, Raymond Lee, Karen Yook, Paul Sternberg, Wen Chen, Ranjana Kishore, Juancarlos Chan * Raymond Lee -- ontology tools etc.5 KB (696 words) - 13:32, 13 July 2018
- ...niela, Faye, Jae, Juancarlos, Karen, Kimberly, Magz, Mark, Paulo, Ranjana, Raymond, Scott, Stavros, Todd, Valerio, Wen2 KB (239 words) - 17:32, 3 December 2020
- | Raymond ||3/16-3/29 ||8/3-8/162 KB (241 words) - 23:04, 13 August 2010
- * coordination between CalTech and Hinxton (Gary, Raymond, Wen), due to the large scale analysis data2 KB (213 words) - 18:30, 1 February 2018
- |[[User:raymond|Raymond]] |[[User:raymond|Raymond]]16 KB (2,207 words) - 23:06, 9 January 2014
- *Raymond: how stable is Datomic? *Raymond: how do we deal with discrepancies between acedb and datomic7 KB (1,137 words) - 17:57, 17 November 2016
- ...gene knockdown phenotypes for more than 100 individual RNAi experiments.||raymond@its.caltech.edu ...e loss in a particular cell lineage leads to loss of mutant rescue, etc. ||raymond@its.caltech.edu11 KB (1,688 words) - 11:06, 21 December 2011
- Raymond: Would be good if there were two dynamic links which were updated as Raymond: it's useful to have new release (dev) ASAP. Would like to continue to7 KB (1,220 words) - 15:50, 25 November 2011
- === Tissue enrichment tool (Raymond) ===5 KB (689 words) - 15:35, 7 April 2016
- *Raymond: integration is important; we need to talk about how much work needs to be **Raymond: will look at it13 KB (2,097 words) - 22:48, 7 April 2011
- * Ranjana will discuss with Raymond and Kevin * Juancarlos and Raymond have been working on5 KB (818 words) - 15:55, 1 November 2018
- Some discussion from Todd and Raymond, modified model slightly.3 KB (354 words) - 11:08, 3 December 2010
- ...n leverage the flow from the CalTech site visits to organise the workshop (Raymond / Kimberley)2 KB (280 words) - 17:48, 1 April 2019
- * Ranjana forwarded a help desk issue, will make a ticket. Raymond, have we offered what they want ? Magda and Mark will look into it. Paul2 KB (279 words) - 16:01, 7 July 2022
- ...gene knockdown phenotypes for more than 100 individual RNAi experiments.||raymond@its.caltech.edu ...e loss in a particular cell lineage leads to loss of mutant rescue, etc. ||raymond@its.caltech.edu16 KB (2,310 words) - 11:05, 21 December 2011
- * Raymond: One person from each site should be there to cover any WormBase knowledge. * Raymond: Help desk github ticket was removing contact information. Now that github5 KB (794 words) - 16:30, 3 June 2021
- Raymond: Since these are not published, we can't curate them and that't the main di2 KB (303 words) - 15:59, 4 November 2021
- *Raymond and Wen worked on putting on Amazon cloud *Switch credit cards (from Raymond's to Caltech)6 KB (971 words) - 16:24, 6 October 2011
- *Raymond will periodically check for "floating" anatomy terms *Paper-anatomy term associations in Citace Minus; Raymond will take care of them6 KB (983 words) - 18:02, 12 July 2012
- The help desk queue includes Raymond Lee, Scott Cain, Karen Yook, Wen Chen, Mark Quinton-Tulloch, Juancarlos Cha |Raymond Lee42 KB (5,358 words) - 16:05, 15 May 2024
- ** Raymond - SOBA for GO......simplified GO graph, use for our data2 KB (274 words) - 15:59, 14 May 2018
- ...> what do we want advice on; Kevin -> advice on tools that we don't have?; Raymond -> Trends on data? Curation and UI; Paul -> community annotation, GOCAM, Me ** Raymond -> need to produce a progress report document so that when we make oral pre11 KB (1,898 words) - 16:43, 7 June 2018
- ** Raymond, Ranjana, Gary, Jae and Karen ok to have a monthly digest. Chris, Wen no em * Caltech (Raymond & Juancarlos) will fix6 KB (906 words) - 15:34, 6 December 2018
- ** Raymond (SObA), Chris (Community curation), Mary Ann, Wen would like to go * Raymond and Juancarlos working on9 KB (1,377 words) - 16:44, 2 February 2017
- ...iomedcentral.com/articles/10.1186/s12859-016-1229-9 David Angeles-Albores, Raymond Y. N. Lee, Juancarlos Chan and Paul W. Sternberg, 2016. "Tissue enrichment2 KB (261 words) - 22:27, 5 August 2019
- * Joesph may be able to meet with Raymond Raymond and Eduardo met with Joseph and decided to have the tool running as is for6 KB (903 words) - 15:28, 2 April 2020
- ...gene knockdown phenotypes for more than 100 individual RNAi experiments.||raymond@its.caltech.edu ...e loss in a particular cell lineage leads to loss of mutant rescue, etc. ||raymond@its.caltech.edu13 KB (1,960 words) - 11:07, 21 December 2011
- * Raymond started documentation1 KB (199 words) - 15:33, 31 May 2013
- ...centric pages; gene centric will be geared to comparisons between species; Raymond suggested a landing page for each species; more focused on the the "what" (2 KB (306 words) - 16:32, 3 November 2016
- ** WormBase Ontology Browser - Raymond Lee * Raymond will video workshops to put online at later date. Blog hilights with summar9 KB (1,431 words) - 23:32, 23 June 2015
- * Raymond - will create our own docs3 KB (347 words) - 14:58, 4 June 2013
- === Raymond, Chris and Juancarlos are working on phenotype viewer === * Raymond and Juancarlos working on alternate displays to allow for rapid visual revi8 KB (1,220 words) - 16:26, 3 September 2015
- *On call: Adam, Cecilia, Chris, Daniela, Juancarlos, Karen, Kimberly, Paulo, Raymond, Scott, Sibyl, Todd, Valerio, Wen, Kevin, Paul D, Gary, Matt, Paul K *Raymond: can this change be coordinated with moving to the centralized curation dat5 KB (816 words) - 16:43, 17 May 2018
- *Will let Raymond know if the disease GAFs are okay after they test these for gene descriptio *Raymond needs the GAFs for WoBR4 KB (695 words) - 14:44, 3 December 2020
- *1500 - Genes in region of genetic map - Raymond *1557 - WormMine - unrecognized genes in list - Raymond, Chris6 KB (1,069 words) - 20:52, 23 July 2013
- *Raymond will take precautions to restore properly; should take a week or less *Raymond lifted Todd's directories over to new hard drive7 KB (1,074 words) - 17:19, 4 October 2012
- ** Gene Name Sanitizer (Wen/Raymond/Caltech?) ** Anatomy and Cell (Raymond)5 KB (670 words) - 16:00, 5 August 2021
- * Raymond establishing a WormBase development environment that Juancarlos can use * Todd can give an AMI (?) ID , letting Raymond create an instance8 KB (1,225 words) - 16:33, 3 October 2013
- * will happen in December and Raymond will update the mails * Raymond added some comments above4 KB (688 words) - 17:08, 21 November 2019
- *** Anatomy function -> focus on site of action -> Raymond *** Is the cell lineage browser gone? Yes, lost in the Datomic transition. Raymond: info is in the ontology browser (relationship between nuclei and cells).5 KB (787 words) - 18:10, 25 August 2022
- * Raymond, Gary, Chris interested in going (to join phenotype ontology developers mee2 KB (305 words) - 17:05, 19 April 2018
- *Cell-centric curation: Raymond Lee ([[Media:18-2008-SAB-Lee.ppt|slides]])2 KB (242 words) - 17:09, 6 January 2011
- ...o a summary graph to see it for a different gene. Please send feedback to Raymond, Chris or Juancarlos.6 KB (850 words) - 01:12, 22 August 2015
- * Juancarlos and Raymond working on * Raymond has URL constructor, for private/internal use; will share internally8 KB (1,262 words) - 15:34, 3 May 2018
- ** Raymond looked into the variant data but we don't have additional info. In terms of ...in cell by cell data. How are we going to serve our users with these data? Raymond: what we have right now is an expression profile. This matches with small s6 KB (982 words) - 16:54, 1 September 2022
- *Raymond: once Gary Williams/Michael Paulini send Tier II files, we can incorporate2 KB (303 words) - 09:13, 5 October 2012
- * Raymond trying to annotate axioms for anatomy function * Raymond attempting to use Noctua to draw relationships between anatomy terms and fu8 KB (1,289 words) - 18:11, 10 November 2016
- * What testing of generation of the GAF could be done (and sent to Raymond)? * Raymond will cover WormBase Ontology Browser8 KB (1,120 words) - 16:19, 5 March 2015
- * Raymond: should we go through a two tier process for models?2 KB (296 words) - 01:51, 5 September 2015
- **Raymond: used for code development/versioning by OICR; may be the best use for Bitb *Raymond: WormBase mirrors8 KB (1,282 words) - 17:08, 7 July 2011
- *Karen, Raymond, Chris will talk to Todd Gene interaction dumping script (Raymond/Todd)9 KB (1,302 words) - 16:38, 2 June 2011
- ** Maybe, but should be free text instead of a modeled tag for WBPersons (Raymond) * (Raymond) Two aspects of strain curation: 1) strains that are available (e.g. from C9 KB (1,490 words) - 15:35, 6 October 2016
- ...he reporter class has a text field that can be used for this. Paul/Daniela/Raymond will discuss the details.2 KB (347 words) - 14:07, 2 July 2021
- ...ndled as other Paper DOIs are handled -might be formalized (DB_info as per Raymond's suggestion)7 KB (934 words) - 19:56, 27 September 2016
- * Student will work with Raymond, Kimberly to do anatomy function & Noctua/GO-CAM curation on dauer developm * Raymond et al. will communicate with Todd and web team about how to handle the data5 KB (670 words) - 15:31, 3 June 2021
- *** Eduardo, Raymond, Todd, Chris3 KB (408 words) - 17:27, 17 December 2020
- * SObA top-slicing (summary view) gets tricky; Raymond looking into better solutions, if available * Todd and Raymond meeting this afternoon5 KB (698 words) - 16:11, 3 January 2019
- * Raymond will look into it2 KB (327 words) - 16:50, 4 January 2018
- === Development environment for Raymond === *Raymond was trying to keep up with the AMIGO 2 development upgrades13 KB (1,983 words) - 16:40, 7 November 2013
- ...gene knockdown phenotypes for more than 100 individual RNAi experiments.||raymond@its.caltech.edu|| ...e loss in a particular cell lineage leads to loss of mutant rescue, etc. ||raymond@its.caltech.edu ||17 KB (2,417 words) - 11:04, 21 December 2011
- * Raymond and Todd will see if they can find a log for archaeological reasons2 KB (329 words) - 17:10, 6 August 2015
- Raymond : Doesn't seem right for the paper not to get priority. We don't need to w Todd : Agree with Raymond, rely on users to look at data + evidence and make their own decisions.15 KB (2,374 words) - 16:00, 17 July 2014
- * https://github.com/WormBase/website/issues/1788 - Abby thinks it's working. Raymond will test it.3 KB (427 words) - 18:31, 3 October 2013
- Raymond asked PAD for insight on how RRIDs are being used, Paul D replied:2 KB (350 words) - 11:50, 6 January 2017
- Follow up question about alternative transcripts...Raymond forwarded email from user.2 KB (376 words) - 16:20, 10 July 2017
- ** Needs patching for WS282 (Raymond) - Adam thinks it can be done as a patch as a hot fix after release.2 KB (354 words) - 16:05, 16 September 2021
