Difference between revisions of "Caltech documentation"
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==postgres== | ==postgres== | ||
*[[WBGene information and status pipeline]] | *[[WBGene information and status pipeline]] | ||
| + | *[[Source and maintenance of OA term info]] | ||
*[[OA forms, tables, scripts, etc]] | *[[OA forms, tables, scripts, etc]] | ||
Revision as of 00:25, 25 September 2013
Contents
- 1 First-pass flagging
- 2 Automation and Text Mining Approaches
- 3 Citace
- 4 Datatype
- 5 Paper Categorization
- 6 Curation Progress
- 7 postgres
- 8 Caltech weekly meetings
- 9 Conference Calls
- 10 Phenote
- 11 Ontology Annotator
- 12 Textpresso
- 13 SVMs for First Pass Curation
- 14 GSA markup
- 15 User Guide 2010
- 16 Interesting, Not-yet-modelled Data Index
- 17 Release note requests from Caltech
First-pass flagging
- First-pass flagging pipelines
- Instructions for the first pass curator:
- Datatypes flagged through the first-pass forms: Datatypes flagged
Automation and Text Mining Approaches
Citace
Datatype
- Antibody
- Concise Descriptions
- Expression Pattern
- Gene Class Descriptions
- Gene Interaction
- Gene Ontology
- Gene-Paper Associations
- Gene Regulation
- Life_Stage
- Molecule
- Movie
- Paper Pipeline
- Phenotypes
- Physical Interactions
- Pictures
- Process pages
- RNAi
- Sequence Feature
- Transgenes
- Disease and Drugs
- Drugs
Paper Categorization
Curation Progress
postgres
- WBGene information and status pipeline
- Source and maintenance of OA term info
- OA forms, tables, scripts, etc
Caltech weekly meetings
Conference Calls
Phenote
Ontology Annotator
Textpresso
SVMs for First Pass Curation
GSA markup
- GSA Markup Workflow
- GSA Markup SOP
- GSA linking pipeline
- Entity classes and problems
- Future Entities for markup
- GSA Markup Meeting Notes
- GO entity markup
