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  • Raymond: Since these are not published, we can't curate them and that't the main di
    2 KB (303 words) - 15:59, 4 November 2021
  • *Raymond and Wen worked on putting on Amazon cloud *Switch credit cards (from Raymond's to Caltech)
    6 KB (971 words) - 16:24, 6 October 2011
  • *Raymond will periodically check for "floating" anatomy terms *Paper-anatomy term associations in Citace Minus; Raymond will take care of them
    6 KB (983 words) - 18:02, 12 July 2012
  • The help desk queue includes Raymond Lee, Scott Cain, Karen Yook, Wen Chen, Mark Quinton-Tulloch, Juancarlos Cha |Raymond Lee
    42 KB (5,353 words) - 19:43, 14 May 2024
  • ** Raymond - SOBA for GO......simplified GO graph, use for our data
    2 KB (274 words) - 15:59, 14 May 2018
  • ...> what do we want advice on; Kevin -> advice on tools that we don't have?; Raymond -> Trends on data? Curation and UI; Paul -> community annotation, GOCAM, Me ** Raymond -> need to produce a progress report document so that when we make oral pre
    11 KB (1,898 words) - 16:43, 7 June 2018
  • ** Raymond, Ranjana, Gary, Jae and Karen ok to have a monthly digest. Chris, Wen no em * Caltech (Raymond & Juancarlos) will fix
    6 KB (906 words) - 15:34, 6 December 2018
  • ** Raymond (SObA), Chris (Community curation), Mary Ann, Wen would like to go * Raymond and Juancarlos working on
    9 KB (1,377 words) - 16:44, 2 February 2017
  • ...iomedcentral.com/articles/10.1186/s12859-016-1229-9 David Angeles-Albores, Raymond Y. N. Lee, Juancarlos Chan and Paul W. Sternberg, 2016. "Tissue enrichment
    2 KB (261 words) - 22:27, 5 August 2019
  • * Joesph may be able to meet with Raymond Raymond and Eduardo met with Joseph and decided to have the tool running as is for
    6 KB (903 words) - 15:28, 2 April 2020
  • ...gene knockdown phenotypes for more than 100 individual RNAi experiments.||raymond@its.caltech.edu ...e loss in a particular cell lineage leads to loss of mutant rescue, etc. ||raymond@its.caltech.edu
    13 KB (1,960 words) - 11:07, 21 December 2011
  • * Raymond started documentation
    1 KB (199 words) - 15:33, 31 May 2013
  • ...centric pages; gene centric will be geared to comparisons between species; Raymond suggested a landing page for each species; more focused on the the "what" (
    2 KB (306 words) - 16:32, 3 November 2016
  • ** WormBase Ontology Browser - Raymond Lee * Raymond will video workshops to put online at later date. Blog hilights with summar
    9 KB (1,431 words) - 23:32, 23 June 2015
  • * Raymond - will create our own docs
    3 KB (347 words) - 14:58, 4 June 2013
  • === Raymond, Chris and Juancarlos are working on phenotype viewer === * Raymond and Juancarlos working on alternate displays to allow for rapid visual revi
    8 KB (1,220 words) - 16:26, 3 September 2015
  • *On call: Adam, Cecilia, Chris, Daniela, Juancarlos, Karen, Kimberly, Paulo, Raymond, Scott, Sibyl, Todd, Valerio, Wen, Kevin, Paul D, Gary, Matt, Paul K *Raymond: can this change be coordinated with moving to the centralized curation dat
    5 KB (816 words) - 16:43, 17 May 2018
  • *Will let Raymond know if the disease GAFs are okay after they test these for gene descriptio *Raymond needs the GAFs for WoBR
    4 KB (695 words) - 14:44, 3 December 2020
  • *1500 - Genes in region of genetic map - Raymond *1557 - WormMine - unrecognized genes in list - Raymond, Chris
    6 KB (1,069 words) - 20:52, 23 July 2013
  • *Raymond will take precautions to restore properly; should take a week or less *Raymond lifted Todd's directories over to new hard drive
    7 KB (1,074 words) - 17:19, 4 October 2012
  • ** Gene Name Sanitizer (Wen/Raymond/Caltech?) ** Anatomy and Cell (Raymond)
    5 KB (670 words) - 16:00, 5 August 2021
  • * Raymond establishing a WormBase development environment that Juancarlos can use * Todd can give an AMI (?) ID , letting Raymond create an instance
    8 KB (1,225 words) - 16:33, 3 October 2013
  • * will happen in December and Raymond will update the mails * Raymond added some comments above
    4 KB (688 words) - 17:08, 21 November 2019
  • *** Anatomy function -> focus on site of action -> Raymond *** Is the cell lineage browser gone? Yes, lost in the Datomic transition. Raymond: info is in the ontology browser (relationship between nuclei and cells).
    5 KB (787 words) - 18:10, 25 August 2022
  • * Raymond, Gary, Chris interested in going (to join phenotype ontology developers mee
    2 KB (305 words) - 17:05, 19 April 2018
  • *Cell-centric curation: Raymond Lee ([[Media:18-2008-SAB-Lee.ppt|slides]])
    2 KB (242 words) - 17:09, 6 January 2011
  • ...o a summary graph to see it for a different gene. Please send feedback to Raymond, Chris or Juancarlos.
    6 KB (850 words) - 01:12, 22 August 2015
  • * Juancarlos and Raymond working on * Raymond has URL constructor, for private/internal use; will share internally
    8 KB (1,262 words) - 15:34, 3 May 2018
  • ** Raymond looked into the variant data but we don't have additional info. In terms of ...in cell by cell data. How are we going to serve our users with these data? Raymond: what we have right now is an expression profile. This matches with small s
    6 KB (982 words) - 16:54, 1 September 2022
  • *Raymond: once Gary Williams/Michael Paulini send Tier II files, we can incorporate
    2 KB (303 words) - 09:13, 5 October 2012
  • * Raymond trying to annotate axioms for anatomy function * Raymond attempting to use Noctua to draw relationships between anatomy terms and fu
    8 KB (1,289 words) - 18:11, 10 November 2016
  • * What testing of generation of the GAF could be done (and sent to Raymond)? * Raymond will cover WormBase Ontology Browser
    8 KB (1,120 words) - 16:19, 5 March 2015
  • * Raymond: should we go through a two tier process for models?
    2 KB (296 words) - 01:51, 5 September 2015
  • **Raymond: used for code development/versioning by OICR; may be the best use for Bitb *Raymond: WormBase mirrors
    8 KB (1,282 words) - 17:08, 7 July 2011
  • *Karen, Raymond, Chris will talk to Todd Gene interaction dumping script (Raymond/Todd)
    9 KB (1,302 words) - 16:38, 2 June 2011
  • ** Maybe, but should be free text instead of a modeled tag for WBPersons (Raymond) * (Raymond) Two aspects of strain curation: 1) strains that are available (e.g. from C
    9 KB (1,490 words) - 15:35, 6 October 2016
  • ...he reporter class has a text field that can be used for this. Paul/Daniela/Raymond will discuss the details.
    2 KB (347 words) - 14:07, 2 July 2021
  • ...ndled as other Paper DOIs are handled -might be formalized (DB_info as per Raymond's suggestion)
    7 KB (934 words) - 19:56, 27 September 2016
  • * Student will work with Raymond, Kimberly to do anatomy function & Noctua/GO-CAM curation on dauer developm * Raymond et al. will communicate with Todd and web team about how to handle the data
    5 KB (670 words) - 15:31, 3 June 2021
  • *** Eduardo, Raymond, Todd, Chris
    3 KB (408 words) - 17:27, 17 December 2020
  • * SObA top-slicing (summary view) gets tricky; Raymond looking into better solutions, if available * Todd and Raymond meeting this afternoon
    5 KB (698 words) - 16:11, 3 January 2019
  • * Raymond will look into it
    2 KB (327 words) - 16:50, 4 January 2018
  • === Development environment for Raymond === *Raymond was trying to keep up with the AMIGO 2 development upgrades
    13 KB (1,983 words) - 16:40, 7 November 2013
  • ...gene knockdown phenotypes for more than 100 individual RNAi experiments.||raymond@its.caltech.edu|| ...e loss in a particular cell lineage leads to loss of mutant rescue, etc. ||raymond@its.caltech.edu ||
    17 KB (2,417 words) - 11:04, 21 December 2011
  • * Raymond and Todd will see if they can find a log for archaeological reasons
    2 KB (329 words) - 17:10, 6 August 2015
  • Raymond : Doesn't seem right for the paper not to get priority. We don't need to w Todd : Agree with Raymond, rely on users to look at data + evidence and make their own decisions.
    15 KB (2,374 words) - 16:00, 17 July 2014
  • * https://github.com/WormBase/website/issues/1788 - Abby thinks it's working. Raymond will test it.
    3 KB (427 words) - 18:31, 3 October 2013
  • Raymond asked PAD for insight on how RRIDs are being used, Paul D replied:
    2 KB (350 words) - 11:50, 6 January 2017
  • Follow up question about alternative transcripts...Raymond forwarded email from user.
    2 KB (376 words) - 16:20, 10 July 2017
  • ** Needs patching for WS282 (Raymond) - Adam thinks it can be done as a patch as a hot fix after release.
    2 KB (354 words) - 16:05, 16 September 2021

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