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- [[Category:Topic page]]111 bytes (13 words) - 00:37, 7 November 2013
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- [[Category:Topic page]]111 bytes (13 words) - 00:37, 7 November 2013
- fpkm image on the expression section on the gene page will be replaced with multiple small images linking from a table after 247. == Topic Curation ==1 KB (164 words) - 17:33, 15 January 2015
- ...the [http://wiki.wormbase.org/index.php/WS247_Models.wrm WS247 Models wiki page] ** Kimberly posted link to web page describing the details2 KB (288 words) - 16:54, 4 December 2014
- [[Topic pages]]<br> ==Proposed structure for the Biological topic (WB biological processes) model==4 KB (503 words) - 00:51, 7 November 2013
- ''back to'' [[Topic pages]]<br> [[Category:Process page]]578 bytes (71 words) - 00:56, 7 November 2013
- ** topic page bug - split tag into different groups * Have all the tracks we need - gene page, rnai, expression1 KB (199 words) - 14:17, 22 July 2014
- ...r lists in the Curation Status Form (CSF) can be further filtered based on topic ...ads WBPaper IDs from a flat file for the current Unfolded Protein Response topic10 KB (1,664 words) - 17:02, 4 December 2013
- === Topic Curation === ** Do we want to display these published diagrams on ?Paper pages and/or ?Topic pages6 KB (974 words) - 17:28, 3 September 2014
- === New curation topic for WS249 === === Topic & Regional meeting abstracts ===7 KB (1,058 words) - 15:32, 2 April 2015
- ** cronjob to get data from "Curation Statistics Page" button at ...angolassi.caltech.edu/~azurebrd/cgi-bin/testing/amigo/wobr/amigo.cgi focus page demo]5 KB (850 words) - 15:32, 5 September 2013
- ...should prioritize the display of human-elegans alignments on every WB gene page, not just in the homology widget, but as a high profile item displayed by d * Chris will send an e-mail on this topic around to staff2 KB (384 words) - 20:25, 21 May 2015
- * Topic curation for WS243 & WS244: Repsonse to Pathogens, Signaling in Innate Immu ...each gene's page in Wormbase, clicking on the link to go to the transcript page, and selecting "view spliced + UTR."4 KB (629 words) - 16:57, 6 February 2014
- === Changing "Biological Process" to "Biological Topic" === === Unfolded Protein Response curation - Pilot topic curation ===13 KB (1,983 words) - 16:40, 7 November 2013
- **A browser will be on each respective ontology page; * Topic Curation10 KB (1,583 words) - 18:16, 5 February 2014
- ...cets/filters available to narrow down results, by object type, species, or topic ...e where all the genes from different species will be presented on the same page with association to disease and association to the GO terms.3 KB (421 words) - 16:39, 20 October 2016
- ...n a community curation pipeline and that haven’t been curated yet for that topic ===== *Facet for topic9 KB (1,375 words) - 16:04, 18 April 2024
- * 2012 to 2013: page impressions increased ~8% * Was an idea to create an enzyme reaction widget on gene page7 KB (1,079 words) - 19:04, 6 November 2014
- === Past meetings posted on the WormBase Meeting page === **[C. elegans topic meeting: Metabolism, Aging, Pathogenesis, Stress and Small RNAs (MAPS)](htt12 KB (1,663 words) - 16:28, 9 October 2023
- ...e.org, or by clicking on the Home link at the top left of any WormBase Web page (http://www.wormbase.org/wiki/index.php/Image:Fig_1_8_01.png). ...record is found, the search routine will sometimes go directly to the Web page for that record (it will automatically do this for Gene pages). However, it3 KB (545 words) - 19:56, 11 August 2010
- The paper editor is accessible either from the curation index page (click on the second link, paper_editor.cgi): http://tazendra.caltech.edu/ ...r. We could keep the link to the old editor, but make a note on the index page that this is the old editor.'''7 KB (1,204 words) - 18:58, 30 June 2014
- ...Someone would like to have their papers added and connect to their person page] * Please put your names beside the topic if you are volunteer to give a talk2 KB (270 words) - 16:48, 3 February 2017
- * Topic Curation ** using the caltech FTP site for storing topic page pathway images for the web team. Where is it, what information do we want t10 KB (1,485 words) - 18:08, 5 March 2014
- ...single link under 'Nomenclature' in black banner in bottom of wormbase.org page, but add a link in widget to redirect to different link for 'other nematode **Process/Topic page4 KB (622 words) - 16:47, 6 August 2014
- ==Query page== The filter for the papers given a topic (unique WBPapers where the pgid is the same for process /10 KB (1,650 words) - 18:12, 29 January 2024
- [action] Kevin will discuss this with Paul D. on Monday and we will discuss topic at the next site-wide meeting ...r the 'community' menu and, for logged-in users, as a widget in the person page (as an empty widget with only the link).3 KB (436 words) - 15:07, 22 July 2019
- ...e off [https://github.com/WormBase/website/issues/7082 #7082]. The protein page "genomic position" coordinates don't exactly map to the gene coordinates or ...ols- may be too noisy. Curators are welcome to prepare few slides on their topic2 KB (308 words) - 15:58, 2 May 2019
- ...mportant to note that Wikis are NOT forums, where individual comments on a topic are collected and presented as a discussion thread. Wikis are more appropri ...ocuments on a Wiki are by their nature open to editing by anyone, spam and page defacement are potential problems. To minimize these problems, we will requ4 KB (573 words) - 02:51, 24 September 2007
- * Will add to the Reagents page (will be under the Resources menu, not there on live site currently) * JD is working on getting new data in; there is a Wiki page for requesting new data; we can add new data there8 KB (1,225 words) - 16:33, 3 October 2013
- **Virtual worm web page & FTP *Curating papers by process or topic7 KB (1,074 words) - 17:19, 4 October 2012
- === Topic for next curator call === * Should Doug and Karen decide topic?8 KB (1,224 words) - 15:34, 21 July 2016
- *[[Example topic pages]] * link to SPELL page for microarray data20 KB (3,088 words) - 19:17, 13 August 2020
- === Topic meetings === ...BioMart search for SignalP and transmembrane proteins, and to the GO term page for "extracellular region" but Peter doesn't think that's exhaustive enough7 KB (989 words) - 16:08, 5 February 2020
- *Rudimentary process page up *We should make an announcement on the main WormBase page that WormMart will remain at WS220 and Intermine will replace it10 KB (1,553 words) - 18:04, 7 February 2013
- * Would be best to link directly to the respective Transgenome database page when displaying their data === AGR gene page ===8 KB (1,289 words) - 18:11, 10 November 2016
- * Would be good to have a community annotation portal/landing page === Topic Images ===8 KB (1,147 words) - 15:33, 7 May 2015
- ...ir of) curator(s) focusing on pulling together and drawing a pathway for a topic * Whole contribution from Caltech (bio-curation) should be about a page8 KB (1,234 words) - 12:36, 4 June 2014
- ...Base/website/issues/1549 1549]] Extra table in Associations widget-Anatomy page * [[https://github.com/WormBase/website/issues/2017 2017]] slt-1 gene page is still suggesting that the gene hasn't been physically mapped, but clearl6 KB (909 words) - 21:56, 21 November 2013
- ...list]] to receive these messages by email (instructions at the end of this page). All community messages will ...tor_Match_Program_Initial_Plan|Initial Plan For The Mentor Match Program]] page for additional details. The program will roll out in November 2020.4 KB (641 words) - 17:26, 10 November 2020
- This page documents the creation of the construct class and all tools needed for its The official model page is [[WormBase_Model:Construct | here]] along with compensatory changes to r10 KB (1,537 words) - 17:05, 28 May 2021
- ** Data type vs. topic-based curation? ** Val Wood and PomBase have found topic-based curation to be more efficient7 KB (1,062 words) - 14:41, 2 August 2018
- ...see as appropriate as we investigate this organizational scheme. This Wiki page is intended to collect and organize our thoughts and proposals as to how to # Determining what our goals should be for tackling a category or topic10 KB (1,279 words) - 18:20, 18 October 2013
- **Gene page ...rdinate times between workshops so introduction could be made in one for a topic in the other workshops.3 KB (552 words) - 17:23, 3 January 2019
- === Neuro Topic Meeting === * Form layout tries to mirror gene page8 KB (1,262 words) - 15:34, 3 May 2018
- * There is a Google Docs page summarising the changes made (412 genes looked at. 72 structures modified. * Kevin: how was the topic chosen?8 KB (1,246 words) - 15:52, 12 November 2013
- * Schedule and Topic signup: http://bit.ly/243UNL2 * Make use of the "Activity" widget on homepage? Replace random page with community contributions?9 KB (1,336 words) - 15:32, 2 June 2016
- ** Grant goes in in January - would be good to have 1 page plan for each topic (including text mining)4 KB (575 words) - 18:18, 6 December 2018
- [[WormBase_Model:Construct | construct model page]]<br> [[Construct | construct wiki page]]<br>37 KB (5,333 words) - 19:07, 27 June 2019
- ...today’s site-wide conference call. Please also refer to the SAB 2014 wiki page. * Topic Curation – how we do this.5 KB (763 words) - 00:51, 19 September 2014
- ...ators can then prioritize their curation based on a particular category or topic ** Clicking to open a new web page versus interactive browsing without reloads7 KB (1,059 words) - 15:37, 1 August 2013
- * We provide options to hide email addresses from WB person page * About a 12-15 area and topic meetings next year10 KB (1,586 words) - 15:30, 2 November 2017
- *as a topic meeting - not as many elegans community members *Overall, want one person at each of the elegans topic meetings this year as well as a couple at the Orlando Mod meeting - differe7 KB (1,249 words) - 17:23, 7 January 2016
- * There is a page for the SAB [[2016_Advisory_Board_Meeting | here]] * Discussing the Datomic migration appears to be a popular topic for the pre-SAB meeting.4 KB (684 words) - 19:43, 5 December 2015
- Topic/Speaker *Start with gene page, that's when you have a single gene --Kimberly4 KB (564 words) - 15:22, 4 April 2019
- *Topic ...so be found here: [http://www.caltech.edu/~wormbase/oa/docs/main.html| Web-page for OA]20 KB (3,124 words) - 19:59, 19 February 2020
- ...e popular model (worms based on C. elegans); may be provided in MOD portal page(s) ** Karen will help with Construct, Transgene, Topic, Molecule OAs5 KB (670 words) - 15:31, 3 June 2021
- Link to SAB meeting wiki page http://wiki.wormbase.org/index.php/2018_Advisory_Board_Meeting Link to SAB meeting wiki page http://wiki.wormbase.org/index.php/2018_Advisory_Board_Meeting11 KB (1,898 words) - 16:43, 7 June 2018
- * Added SimpleMine-like topic search: http://tazendra.caltech.edu/%7Eazurebrd/cgi-bin/forms/spellmine.cgi ..."Expr1234" or "WBPaper00032062:age_regulated_genes" with link to relevant page5 KB (818 words) - 15:55, 1 November 2018
- This is a big discussion topic, so the intent for this call is to seed some of these discussion, and come Cbr-nurf-1 - As a landing page on the website for a description of the complex loci and to define the link8 KB (1,391 words) - 11:57, 6 August 2014
- ...h schedule. Proposal then: reinstate the second all-hands conference call. Topic-based calls for smaller groups can be arranged outside the main calls when Chris : Page with more information somewhere.15 KB (2,374 words) - 16:00, 17 July 2014
- == Main Page == Above is a screenshot of the main page of the Curation Status Form. The user/curator is requested to identify who144 KB (18,174 words) - 19:56, 21 January 2021
- * Would be good to revisit the paper page display for what is referenced in the paper * Gene Set Enrichment Tool: redirects to local/Caltech site that serves the page11 KB (1,703 words) - 15:27, 5 April 2018
- * Almost done with work for topic migration ** Review ABC topic/entity table36 KB (4,994 words) - 17:27, 14 February 2024
- *Sequence and protein curation: tools, databases (topic-specific; pathways, cancer, etc.) **One page for each gene; already have ~10,000 articles7 KB (1,158 words) - 17:20, 3 May 2012
- * is approaching, I think it is worth bringing that topic up again. and appears under Other_orthologs in the Gene summary page.7 KB (1,220 words) - 15:50, 25 November 2011
- * Can go to "neuron" anatomy page and search expression patterns table for the term "marker"; not optimal * Alleles may also be referenced within a gene page disease table11 KB (1,664 words) - 16:29, 7 December 2017
- ** Will assess topic interest ahead of time ...be displayed on the gene page/expression widget other than the Expression page12 KB (1,930 words) - 17:12, 1 February 2018
- |'''OA form<br>wiki page<br>model[[WormBase_Models| (all models)]]'''||'''Curation focus'''||'''Post ...ages#Topic_Curation_OA| Topic wiki]]<br>[[WS225_Models.wrm| WS225 model]]||Topic curation||pro_<br>[[All_OA_tables#pro_tables_Topic|pro_tables]]||/home/aced20 KB (3,050 words) - 21:01, 19 April 2017
- * When looking at lab page, if there is a problem with a person's info, changes would be made (request ** Everyone should sign up for a topic if they haven't already8 KB (1,189 words) - 14:10, 5 July 2018
- * Person curation is topic of next AGR curator call (April 12th) ** Discussed layout for gene report page for AGR 0.610 KB (1,527 words) - 15:32, 6 April 2017
- With the move to the new paper editor, the instructions on this page are now obsolete. --kjy 18:03, 29 July 2010 (UTC) ...curators are accessible through the "Comment" button at the bottom of the page.||kyook@caltech.edu, vanauken@caltech.edu||17 KB (2,417 words) - 11:04, 21 December 2011
- **Example: Gene page; only update information relevant to gene class to be displayed *Todd made Clone page;13 KB (2,097 words) - 22:48, 7 April 2011
- ** in the expression section on the gene page highlight the objects that are Sequence feature related. Add in the table a * things noted - not necessarily to do with the topic in hand23 KB (3,248 words) - 12:58, 22 September 2014
- ...to any official mirrors are given immediately near the bottom of the front page (http://www.wormbase.org/wiki/index.php/Image:Fig_1_8_01.png). ...front page's site directory. This will lead to the WormBase Mailing Lists page http://www.wormbase.org/mailarch. One can than subscribe to any E-mail list30 KB (4,765 words) - 20:03, 11 August 2010
- ...d individual laboratories and display them in the WormBase gene expression page. This is a mock page of the expression page for gene K07C11.4.120 KB (19,719 words) - 16:44, 20 October 2023
- ...earch terms; studying a gene, sequence, or protein with its individual web page, or with the Genome Browser; searching for proteins by BLAST hits, sequence ...TING_THE_WormBase_HOME_PAGE|BASIC PROTOCOL 1: NAVIGATING THE WormBase HOME PAGE]]==103 KB (16,375 words) - 23:39, 30 November 2010
