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Jump to navigationJump to searchCreate the page "Paper" on this wiki! See also the search results found.
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- #[[2010 - Paper Pipeline: Documentation and Instructions]] #[[New Paper Model - Model and Changes to Pipeline]]1 KB (130 words) - 21:21, 15 March 2021
- ...CC, I'd initially just searched through all paper types, but removing some paper types from the searches would more accurately reflect the real curation pip ...I don't really know what types of papers are included in some of the other paper types like COMMENT and LETTERS, so it'd be good to know so I can make a bet2 KB (259 words) - 18:08, 16 August 2010
- ! [http://dev.wormbase.org/db/misc/paper?name=WBPaper00035124;class=Paper 00035124] .../wiki/index.php/November_25%2C_2009_-_Sequence_Curation_Flags#Action_Items Paper List]473 bytes (68 words) - 18:50, 10 August 2010
- #REDIRECT [[Using the Paper Editor]]36 bytes (5 words) - 21:39, 8 May 2011
- We have several options for making gene-paper associations: ...iates genes and proteins mentioned in paper and meeting abstracts with the paper object in postgres. Note that the script was only recently updated (Octobe1 KB (164 words) - 23:35, 14 February 2011
- The paper editor is accessible either from the curation index page (click on the seco '''Might be helpful to reorganize the index page, to put all of the paper-related forms together. We could keep the link to the old editor, but make7 KB (1,204 words) - 18:58, 30 June 2014
- // ?Paper class - krb 040223 // ?Paper class - krb 0402235 KB (471 words) - 16:07, 4 October 2010
- Back to [[Paper Pipeline]]71 bytes (11 words) - 21:51, 11 May 2011
- ...from the journal itself. An e-mail alert is sent to WB QC curators that a paper has been approved and has entered the pipeline. ...11/20/09) or WBPaperIDs were getting mixed up (see e-mail from 1/15/10) or paper information was not getting entered properly (see e-mails 2/15/10, 2/16/11)3 KB (455 words) - 22:01, 16 May 2011
- = Methods & Approaches for Paper Categorization =10 KB (1,279 words) - 18:20, 18 October 2013
- 90 bytes (15 words) - 13:16, 5 November 2018
- =PMID Downloads and Paper Editor= ...re dumping the papers file, double-check the 'Find Dead Genes' list on the paper editor and make any necessary updates.2 KB (320 words) - 20:59, 12 May 2017
- =Approving Papers through the Paper Editor= ...c.cgi/wormbase/wspec/models.wrm?root=ensembl&view=log as specified in the ?Paper model] in WormBase.3 KB (403 words) - 16:02, 27 March 2019
- [http://dev.wormbase.org/db/misc/paper?name=WBPaper00004402;class=Paper WBPaper00004402] Ahringer, Chromosome I RNAi screen [http://dev.wormbase.org/db/misc/paper?name=WBPaper00004402;class=Paper WBPaper00004403] Gonczy, Chromosome III RNAi cell division screen2 KB (313 words) - 18:20, 16 August 2010
- Back to [[Paper Pipeline]] =List of Paper Tables in Postgres (Alphabetical)=25 KB (3,238 words) - 16:42, 8 November 2019
- ...put paper titles from a list of input paper IDs. The tool accepts WormBase Paper IDs (e.g. WBPaper00012345), PubMed IDs (pmid12345678) or digital object ide ...they would like to see, including WBPaper ID, PubMed ID (pmid), DOI and/or paper title. For example, a series of WBPaper IDs may be entered like this:1 KB (265 words) - 21:02, 11 March 2015
- '''Correct invalid PMIDs and their associated paper types - Kimberly''' ...t.cgi if check if a DOI already exists in wpa_identifier, don't create new paper then, just the afp_passwd. -- DONE7 KB (1,103 words) - 18:08, 16 August 2010
- * Remove redundant gene-paper associations Not sure how this is generated; I believe this was done before my time as paper curator.4 KB (556 words) - 12:45, 21 May 2019
- Back to [[Paper Pipeline]] =Paper Pipeline Documentation=412 bytes (47 words) - 15:19, 15 April 2011
- '''Instructions for adding a PMID identifier to a Paper Object''' ...indexed for MEDLINE, but we don't have the PMID, you can add it using the paper editor.2 KB (381 words) - 16:53, 2 November 2010
Page text matches
- ...rmbase.org/wiki/index.php/New_Paper_Model_-_Model_and_Changes_to_Pipeline Paper Model Changes] '''For checking the indexing status of a paper in PubMed, we need to check the Status tag at the beginning of the record:'2 KB (155 words) - 18:26, 4 December 2009
- #[[2010 - Paper Pipeline: Documentation and Instructions]] #[[New Paper Model - Model and Changes to Pipeline]]1 KB (130 words) - 21:21, 15 March 2021
- Paper Types that will get '''Primary Data Tag''' (these types will only have a si Paper Types that will get '''No Primary Data Tag''':856 bytes (106 words) - 18:22, 16 August 2010
- #[[Gene-Paper Connections]] #[[Genetics Paper Pipeline]]388 bytes (49 words) - 20:02, 15 April 2011
- '''Adding Missing Authors to a Paper''' If authors are missing from a paper object, they can be added by clicking on the edit box to the right of the a588 bytes (110 words) - 18:55, 3 March 2011
- This is fixed for when the paper is approved and brought into postgres, but not for the display on the edito Back to [[Paper Pipeline]]156 bytes (28 words) - 13:41, 12 May 2011
- Back to [[Paper Pipeline]] =Paper Pipeline Documentation=412 bytes (47 words) - 15:19, 15 April 2011
- ...ences and one evidence was valid while another was invalid, the valid gene-paper connection was transferred even if the invalid connection was actually corr This resulted in a resurfacing of dead gene-paper connections for the WS213 build.2 KB (279 words) - 18:55, 16 August 2010
- === Molecule class to paper class connectivity === Reference ?Paper XREF Molecule587 bytes (86 words) - 10:07, 28 November 2012
- ...id PMID. For this reason, I haven't approved corrections or errata in the paper editor. It would, I think, be good to have corrections and errata in the WB paper collection, though, but if we want them we'll need to develop a new pipelin1,004 bytes (161 words) - 20:09, 15 April 2011
- '''Mapping of current ?Paper Type to new ?Paper Type:''' Note: all ?Paper Types are listed, even if there is no change to the text. However, new or1 KB (205 words) - 17:49, 17 August 2010
- We have several options for making gene-paper associations: ...iates genes and proteins mentioned in paper and meeting abstracts with the paper object in postgres. Note that the script was only recently updated (Octobe1 KB (164 words) - 23:35, 14 February 2011
- === WB Genetics Paper - Submission Monday, December 11th === ...m WormBase to the Alliance. Still more a planning document than a finished paper. '''Everyone should check the document and add things to be discussed, para1 KB (159 words) - 18:22, 7 December 2023
- ...om a paper object. This doesn't happen often and usually applies to older paper entries. ...w that you need to delete these authors. She will also need to remove any paper-person connections from the entry.1 KB (234 words) - 15:30, 15 April 2011
- '''Background:''' When we started using the new Paper Types, we included a new Type, Book. In the ?Paper model, books and book chapters are related to one another by the Contains a372 bytes (60 words) - 20:54, 10 August 2010
- === Paper ===944 bytes (131 words) - 20:41, 13 August 2010
- * Paper retraction134 bytes (16 words) - 11:57, 2 January 2020
- '''Mapping of current ?Paper Type to new ?Paper Type:''' Note: all ?Paper Types are listed, even if there is no change to the text. However, new or1 KB (183 words) - 17:49, 17 August 2010
- ...put paper titles from a list of input paper IDs. The tool accepts WormBase Paper IDs (e.g. WBPaper00012345), PubMed IDs (pmid12345678) or digital object ide ...they would like to see, including WBPaper ID, PubMed ID (pmid), DOI and/or paper title. For example, a series of WBPaper IDs may be entered like this:1 KB (265 words) - 21:02, 11 March 2015
- *Issue #8907: WBPaper00063926 has no title in ACeDB. The paper title exists in postgres but not in ACeDB. In WS287, there are 8 papers fro <br>Paper : "WBPaper00062581"2 KB (348 words) - 17:52, 2 February 2023
