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- **See the [[User_Guide_for_Curators]] for documentation of how the form works from a users' perspective. **See the [[ccc.cgi documentation]] for more specific details about the code.5 KB (817 words) - 15:11, 18 February 2014
- '''WormBase::API Czar''' -- ''Oversee development of the external Model'' -- '''Norie'' * See the [[Website:Profiling|Profiling documentation]] for additional details and progress.2 KB (261 words) - 00:48, 24 December 2010
- * Citace upload deadline will be 6pm Monday, November 25th (added to WormBase calendar) * We will want to provide a public notice (likely via the WormBase blog) about what topic we have focused on for that release of the database/10 KB (1,664 words) - 17:02, 4 December 2013
- ...velopment environments help to avoid these conflicts. But with a site like WormBase that has large memory and hard disk requirements, maintaining a separate en http://bitbucket.org/tharris/wormbase-admin/src/tip/util/create_private_wormbase/create_private_wormbase.sh2 KB (381 words) - 18:42, 17 August 2010
- This method does not lift-over the data to the current version of WormBase. This data will be mapped to WS190. This a temporary fix while we wait fo ** -> wb-dev : /usr/local/wormbase/gbrowse_current/conf/FOLDER_SPECIFIED_IN_WORM.CONF2 KB (370 words) - 22:56, 10 August 2010
- ** Raymond: thinking of putting blurb on a separate documentation page * Can we track who is using this tool (and others)? SObA is hosted by WormBase so we'd have to ask Todd (Google analytics); SimpleMine is Caltech hosted s6 KB (911 words) - 17:13, 6 June 2019
- * WormBase Social Hour? * WormBase list of data types to bring into the Alliance3 KB (408 words) - 17:27, 17 December 2020
- "ftp://ftp.sanger.ac.uk/pub/wormbase/WS${WB_RELEASE} $ cd $HOME/mart-build/scripts/wormbase-mart2 KB (289 words) - 18:24, 17 August 2010
- ...Wormbase proteins (Wormpep) and they are displayed in the context of the Wormbase gene page. $WORMBASE/util/import_export/compile_3d_data/3 KB (408 words) - 23:36, 13 August 2010
- ...me effort; essentially only one person); already had most of the requested documentation ** Improved documentation of plans and workflows5 KB (611 words) - 17:09, 18 April 2019
- WormBase staff can find this document in the "Documentation" directory and edit it there. = About Groups at WormBase =5 KB (757 words) - 01:45, 2 June 2014
- 6. Documentation I'd like to be able to generate the REST interface documentation automatically. we can do this easily with good POD.9 KB (1,048 words) - 14:59, 15 February 2011
- http://wormbase.org ''The main Web site for WormBase. It is meant to be slightly less bleeding-edge than the development site, b3 KB (514 words) - 23:35, 13 August 2010
- | Is the wormbase pointer linked to the newly created acedb? | Is the Multi-Ontology Search Running? <br>URL: http://dev.wormbase.org/db/ontology/search3 KB (489 words) - 18:14, 17 August 2010
- ** temporarily deployed at http://dev.wormbase.org:9004/, Kimberly shared with GO group for feedback * Worked with Todd to get intermine accessible at http://intermine.wormbase.org/2 KB (280 words) - 14:45, 12 April 2016
- These parameters should be set in the my.cnf file (/etc/my.cnf on WormBase servers). <br> <code>brie3</code> (the primary WormBase development machine) acts as the master server, with <code>server-id = 1</c3 KB (417 words) - 17:50, 16 August 2010
- ...ges of individual datasets. This are shipped as virtual disks for use with WormBase virtual machines. [[Category:Developer documentation]]2 KB (261 words) - 18:27, 11 August 2010
- ...o at Kris Gunsalus' group at NYU. This tool is used by Wormbase to display Wormbase interaction data. ...d installer at this time and is installed manually. After it is installed, Wormbase interaction data needs to be dumped from AceDB and loaded to MySQL. Finally7 KB (1,133 words) - 17:52, 16 August 2010
- | Is the wormbase pointer linked to the newly created acedb? | Is the Multi-Ontology Search Running? <br>URL: http://dev.wormbase.org/db/ontology/search3 KB (530 words) - 18:14, 17 August 2010
- Return to [[Caltech documentation]] ==Form Documentation==11 KB (1,666 words) - 17:53, 19 June 2014
- ** planning on remaining on wormbase as volunteer and handling intermine issues * Documentation - spreadsheet2 KB (240 words) - 16:14, 27 September 2013
- .../github.com/WormBase/website/issues/9268 New widget/section on how to cite WormBase] * [https://github.com/WormBase/website/issues/9266 Issue with ASNS-1 (started at Hixton, then bounced to C3 KB (454 words) - 18:36, 10 July 2023
- | [https://github.com/WormBase/website/issues?direction=desc&labels=&milestone=10&page=1&sort=updated&stat | [https://github.com/WormBase/website/issues/assigned/tharris?direction=desc&labels=&milestone=10&sort=up3 KB (451 words) - 20:13, 21 May 2013
- | Is the wormbase pointer linked to the newly created acedb? | Is the Multi-Ontology Search Running? <br>URL: http://dev.wormbase.org/db/ontology/search4 KB (717 words) - 18:20, 17 August 2010
- Back to [[Caltech documentation]] [http://www.wormbase.org/wiki/index.php/Texpresso/Author/Curator_interim_form What type of data5 KB (746 words) - 18:57, 10 August 2010
- | Is the wormbase pointer linked to the newly created acedb? | Is the Multi-Ontology Search Running? <br>URL: http://dev.wormbase.org/db/ontology/search4 KB (719 words) - 18:21, 17 August 2010
- https://spreadsheets.google.com/a/wormbase.org/spreadsheet/ccc?key=0Aj0AS0c7xC1VdGZSQnlvdTBlbUpPRWJVYlE4Tk9WRlE&hl=en_ * Documentation and boilerplate in place (all)2 KB (310 words) - 00:50, 14 July 2011
- * TH : wormbase infrastructre doc * Documentation2 KB (280 words) - 19:14, 10 August 2010
- | Is the wormbase pointer linked to the newly created acedb? | Is the Multi-Ontology Search Running? <br>URL: http://dev.wormbase.org/db/ontology/search4 KB (738 words) - 18:20, 17 August 2010
- | Is the wormbase pointer linked to the newly created acedb? | Is the Multi-Ontology Search Running? <br>URL: http://dev.wormbase.org/db/ontology/search4 KB (723 words) - 18:21, 17 August 2010
- | Is the wormbase pointer linked to the newly created acedb? | Is the Multi-Ontology Search Running? <br>URL: http://dev.wormbase.org/db/ontology/search4 KB (723 words) - 18:21, 17 August 2010
- | Is the wormbase pointer linked to the newly created acedb? | Is the Multi-Ontology Search Running? <br>URL: http://dev.wormbase.org/db/ontology/search4 KB (725 words) - 18:20, 17 August 2010
- ...created from multiple types of IDs at the same time (i.e. Uniprot name and WormBase protein IDs). In order to take full advantage of lists, it is recommended t ...d or changed, and other information can be entered, like a description for documentation, among other things. If you are logged in, the list will show in your ''My3 KB (453 words) - 19:49, 13 November 2018
- | Is the wormbase pointer linked to the newly created acedb? | Is the Multi-Ontology Search Running? <br>URL: http://dev.wormbase.org/db/ontology/search4 KB (725 words) - 18:21, 17 August 2010
- Look at lib/WormBase/Web/Controller.pm. http://bitbucket.org/tharris/wormbase/src/tip/lib/WormBase/Web/Controller.pm3 KB (575 words) - 18:47, 11 August 2010
- == The C. briggsae genome in WormBase == ...genome (Stein et.al, PloS Biology, 2003) has been fully incorporated into WormBase. The C. briggsae genome can be viewed by itself or in synteny with the C. e6 KB (914 words) - 15:39, 24 September 2007
- | Is the wormbase pointer linked to the newly created acedb? | Is the Multi-Ontology Search Running? <br>URL: http://dev.wormbase.org/db/ontology/search4 KB (610 words) - 18:20, 17 August 2010
- | Is the wormbase pointer linked to the newly created acedb? | Is the Multi-Ontology Search Running? <br>URL: http://dev.wormbase.org/db/ontology/search4 KB (735 words) - 18:22, 17 August 2010
- | Is the wormbase pointer linked to the newly created acedb? | Is the Multi-Ontology Search Running? <br>URL: http://dev.wormbase.org/db/ontology/search4 KB (735 words) - 18:22, 17 August 2010
- :http://wiki.wormbase.org/index.php/Website:Profiling * Documentation and boilerplate in place (all)2 KB (340 words) - 18:03, 20 July 2011
- ...s of WormBase have been established for each developer at brie3:/usr/local/wormbase-devel. Developing and testing new code in a private installation ensures th ...ng production quality, feedback should also be solicited from wormbase-dev@wormbase.org.4 KB (600 words) - 14:55, 10 June 2014
- ==1. Take a look at the original page on dev.wormbase.org== * Look for common elements that already existing in WormBase::Model.pm. You can ignore these (although you still need to specify them i3 KB (404 words) - 21:07, 9 August 2010
- | Is the wormbase pointer linked to the newly created acedb? | Is the Multi-Ontology Search Running? <br>URL: http://dev.wormbase.org/db/ontology/search4 KB (762 words) - 18:20, 17 August 2010
- ** wormbase.org accounts via the web-app * Test site for release 3 live: test.parasite.wormbase.org11 KB (1,714 words) - 11:04, 27 July 2015
- :http://wiki.wormbase.org/index.php/Website:Profiling ...y commited scripts; Todd will slot in to pipeline for WS227 (see Xapian in WormBase doc)3 KB (440 words) - 20:32, 27 July 2011
- ...rty library, please add the library to the /js directory tree, load it via wormbase.js and document its use here or on another wiki page (or at least provide a = wormbase.js =5 KB (743 words) - 23:43, 13 August 2010
- = WormBase Coding Standards and Style Guide = =Documentation=6 KB (950 words) - 15:36, 19 June 2014
- See [[WormBase Staff Resources]]. ===WormBase WebDev Team Members/Contacts===11 KB (1,786 words) - 14:31, 17 May 2016
- Is there a link from WormBase to Alaska, and an announcement about its function? == WormBase resources for non-coding RNA ==3 KB (561 words) - 18:39, 6 February 2020
- ...se obtained from computational analysis-'IEA annotations' are displayed by WormBase. Clicking on the reference links to the citation display page. ...etc. Clicking on the evidence code links to the Gene ontology consortium's documentation on evidence codes and their usuage.3 KB (502 words) - 18:28, 17 August 2010
