Search results
From WormBaseWiki
Jump to navigationJump to searchCreate the page "WormBase Model:?Interaction" on this wiki! See also the search results found.
Page title matches
- [[WormBase Models]] == Old Model ==12 KB (1,431 words) - 19:06, 20 March 2012
Page text matches
- = Agenda and Notes - BioGRID and WB interaction meeting.= ;item 1 - Mapping of Physical interaction terms/types between WB and BioGRID.1 KB (240 words) - 22:36, 22 February 2011
- == WS249 model == === ?Interaction model (Chris) ===1 KB (198 words) - 17:01, 16 April 2015
- ...ist of the most prominent classes in use in the AceDB database employed by WormBase. To display the current model of any class, include the following text in your documentation:4 KB (568 words) - 11:06, 23 May 2011
- [[WormBase Models]] == Model ==3 KB (275 words) - 01:07, 6 February 2014
- :: Remove interaction based phenotypes from existing tables-→ new table ;item 3 - Interaction Model (slides 4-5, attached .ppt in documents distributed section)3 KB (475 words) - 22:50, 17 December 2010
- [[WormBase Models]] ?Interaction700 bytes (98 words) - 09:44, 4 October 2010
- = Agenda - BioGRID and WB interaction meeting.= ;item 2 - Mapping of interaction terms between WB and BioGRID. (Attached Excel and PowerPoint)3 KB (391 words) - 22:13, 22 February 2011
- [[WormBase Models]] == Old Model ==12 KB (1,431 words) - 19:06, 20 March 2012
- == 1. Life_stage model change == Life_stage model change proposal:1 KB (205 words) - 16:55, 17 May 2012
- [[WormBase Models]] == Model ==2 KB (200 words) - 08:23, 5 October 2010
- [[WormBase Models]] == Model ==3 KB (312 words) - 15:14, 15 July 2010
- [[WormBase Models]] Interaction ?Interaction XREF Molecule_interactor // Chris WS2446 KB (543 words) - 23:29, 15 March 2016
- Physical Interaction model *Separating out from general "Interaction" model4 KB (650 words) - 17:08, 1 September 2011
- ...cycle. Please review the file [http://cvs.sanger.ac.uk/cgi-bin/viewvc.cgi/wormbase/wspec/models.wrm?revision=1.376&root=ensembl&view=markup models.wrm] in the ?Interaction4 KB (503 words) - 08:30, 22 June 2012
- PPI (Protein-Protein Interaction) New pipeline proposal is to retrieve information from WormBase ftp site, which will be updated with each release.4 KB (556 words) - 12:45, 21 May 2019
- Textpresso Interaction Sentences *Need to discuss what sentences should be kept as adequate evidence of interaction and placed in remarks5 KB (847 words) - 17:49, 1 March 2012
- ...reviously only with a text description are getting updated to fit the data model === Interaction-Gene associations ===4 KB (633 words) - 19:09, 6 January 2015
- *Should we take minutes of Caltech WormBase group meetings and send around? *WormBase-wide conference call twice per month8 KB (1,282 words) - 17:08, 7 July 2011
- == The A - Z of Ace Model and Redesign Page == ...ndex of available Ace classses; see the [https://spreadsheets.google.com/a/wormbase.org/ccc?key=tygSYCz49YW5hyCcYMHUZ1Q#gid=2 Google Doc] for migration status.12 KB (1,559 words) - 18:14, 15 June 2011
- === Construct model/annotation === ...d to add "Construct" under list of "Detection methods" in the ?Interaction model4 KB (622 words) - 16:47, 6 August 2014
- [[WormBase Models]] == Model ==5 KB (471 words) - 16:07, 4 October 2010
- **Chris will add all model changes proposed for WS233 **?Interaction model "Rearrangement" tag needs an XREF and ?Rearrangement model needs an "Interactor" tag6 KB (983 words) - 18:02, 12 July 2012
- * http://wiki.wormbase.org/index.php/2018_Advisory_Board_Meeting *?RO_term proposal sent to models@wormbase list4 KB (691 words) - 17:16, 21 June 2018
- EPIC data into WormBase *Need to modify model and display for data7 KB (1,070 words) - 17:47, 1 March 2012
- [[WormBase Models]] Updated model and unused tags for WS245 elegans data from pre-merged BUILD/elegans databa4 KB (394 words) - 08:39, 16 September 2014
- * What implications does this have for the WormBase Ontology Browser? === Physical Interaction Curation ===8 KB (1,120 words) - 16:19, 5 March 2015
- Interaction model WormBase meeting announcement6 KB (903 words) - 16:37, 5 January 2012
- [[WormBase Models]] ==Updated model for WS245==13 KB (1,341 words) - 20:12, 22 September 2015
- ==== Unified Interaction model - Chris & Kimberly ==== * PaulD: The model is OK but is the web capable of displaying it?5 KB (800 words) - 10:09, 17 February 2012
- *WormBase curates phenotypes, pathways, etc. *WormBase Process curation could really benefit from GO's adoption of this strategy7 KB (1,019 words) - 20:58, 12 April 2012
- *Make link on WormBase homepage *Will add note to site about how the model may be integrated into WormBase5 KB (752 words) - 17:07, 7 July 2011
- *WormBase communicate/work with DCC personnel for data wrangling during post-DCC era? *Wei wei asking about how to update with WormBase4 KB (612 words) - 17:13, 1 December 2011
- === GO data model change === * Worm pick holders (pencil grips) with WormBase logos; can they be printed on?7 KB (1,058 words) - 15:32, 2 April 2015
- Ticket: https://github.com/WormBase/website/issues/8296 Issue: Genetic Map tool down with the following error: Caught exception in WormBase::Web::Controller::Tools->tools "Could not connect to database acedb _WS280,2 KB (347 words) - 14:07, 2 July 2021
- **Performs similar to WormBase **Todd has made progress with getting Intermine for WormBase7 KB (1,158 words) - 17:20, 3 May 2012
- ...arize how the Phenotype2GO-based GO annotations will be handled for future WormBase builds and GO uploads. ...ting for a genetic interaction. To distinguish these, can we include the ?Interaction ID in the With/From column along with the WBRNAi and WBPhenotype IDs?7 KB (1,164 words) - 17:54, 19 February 2015
- == 1. Model changes (Hinxton) == 1a) Variation model sign off7 KB (1,182 words) - 13:50, 20 April 2012
- *What would WormBase look like without any manually curated data? === Interaction changes ===8 KB (1,225 words) - 16:33, 3 October 2013
- * ?Construct model === ?Construct model ===8 KB (1,218 words) - 17:46, 2 April 2014
- [[WormBase Models]] == Model ==7 KB (712 words) - 10:40, 4 October 2010
- Ranjana - Preplanning WormBase side meetings at IWM? *Two Wormbase Plenary talks9 KB (1,302 words) - 16:38, 2 June 2011
- *Yuling should contact FlyBase to make sure they're OK, once he has WormBase SVM working Physical interaction model7 KB (1,064 words) - 19:12, 3 November 2011
- =Interaction Curation= ===upload Gary and Chris RNAi-based interaction objects into OA===50 KB (5,228 words) - 15:10, 21 July 2017
- Transgene Model *Murky genetic interaction curation?7 KB (1,103 words) - 18:28, 5 May 2011
- New release of WormBase WS160, Wormpep160 and Wormrna160 Thu Jun 15 16:29:46 BST 2006 http://wwwdev.sanger.ac.uk/Projects/C_elegans/WORMBASE6 KB (706 words) - 10:50, 21 December 2011
- = The A - Z of WormBase Models = Document created from [http://cvs.sanger.ac.uk/cgi-bin/viewvc.cgi/wormbase/wspec/models.wrm?root=ensembl&view=markup&pathrev=WS218 WS218] models.16 KB (2,207 words) - 23:06, 9 January 2014
- New release of WormBase WS288 WS288 was built by Stavros Diamantakis with the input from the WormBase Community and Team. Thank you!16 KB (1,733 words) - 21:55, 11 May 2023
- ...a testing environment for curators/users. we'll have to rely on juancarlos.wormbase.org as cost/benefit analysis is unfavourable to consider other options. === Phentoype-association file: Attributing phenotypes to genes via genetic interaction ===6 KB (906 words) - 21:38, 30 September 2015
- * Wen will make the model change proposal * Many authors want to share and make links to their database/website via WormBase10 KB (1,464 words) - 17:09, 13 August 2015
- New release of WormBase WS284 species/ DIR - contains a sub dir for each WormBase species (G_SPECIES)17 KB (1,841 words) - 21:54, 11 May 2023
