Difference between revisions of "Caltech documentation"
From WormBaseWiki
Jump to navigationJump to searchm (→GSA markup) |
|||
| Line 64: | Line 64: | ||
==GSA markup== | ==GSA markup== | ||
| + | * [http://wiki.wormbase.org/index.php/Genetics_Markup_by_Textpresso_and_First_Pass GSA Markup Workflow] | ||
* [[GSA Markup SOP]] | * [[GSA Markup SOP]] | ||
* [[GSA linking pipeline]] | * [[GSA linking pipeline]] | ||
Revision as of 19:57, 2 December 2011
Contents
First-pass flagging
- First-pass flagging pipelines
- Instructions for the first pass curator:
- Datatypes flagged through the first-pass forms: Datatypes flagged
Automation and Text Mining Approaches
Citace
Datatype
- Antibody
- Concise Descriptions
- Expression Pattern
- Gene Class Descriptions
- Gene Interaction
- Gene Ontology
- Gene-Paper Associations
- Gene Regulation
- Molecule
- Paper Pipeline
- Phenotypes
- Physical Interactions
- Pictures
- Process pages
- RNAi
- Transgenes
Curation Progress
postgres
Caltech weekly meetings
Conference Calls
Software/tool development and technical issues
Textpresso
SVMs for First Pass Curation
GSA markup
- GSA Markup Workflow
- GSA Markup SOP
- GSA linking pipeline
- Entity classes and problems
- Future Entities for markup
- GSA Markup Meeting Notes
- GO entity markup
