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- [[WormBase Models]] == Model ==3 KB (318 words) - 00:53, 7 December 2010
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- [[WormBase Models]] == Model ==3 KB (318 words) - 00:53, 7 December 2010
- == WS249 model == === ?Interaction model (Chris) ===1 KB (198 words) - 17:01, 16 April 2015
- ...ist of the most prominent classes in use in the AceDB database employed by WormBase. To display the current model of any class, include the following text in your documentation:4 KB (568 words) - 11:06, 23 May 2011
- [[WormBase Models]] == Model ==4 KB (497 words) - 22:42, 6 December 2010
- * Describe how to develop for the WormBase implementation **document fetching the WormBase code3 KB (365 words) - 19:14, 10 August 2010
- * Chrome failing to download ftp data [https://github.com/WormBase/website/issues/8087 #8087] ** Harmonized Alliance model would be persistent and integrated.4 KB (743 words) - 12:22, 5 March 2021
- [[WormBase Models]] == Model ==5 KB (471 words) - 16:07, 4 October 2010
- [[WormBase Models]] == Model ==5 KB (514 words) - 21:15, 7 December 2010
- == The A - Z of Ace Model and Redesign Page == ...ndex of available Ace classses; see the [https://spreadsheets.google.com/a/wormbase.org/ccc?key=tygSYCz49YW5hyCcYMHUZ1Q#gid=2 Google Doc] for migration status.12 KB (1,559 words) - 18:14, 15 June 2011
- Ticket: https://github.com/WormBase/website/issues/8296 Issue: Genetic Map tool down with the following error: Caught exception in WormBase::Web::Controller::Tools->tools "Could not connect to database acedb _WS280,2 KB (347 words) - 14:07, 2 July 2021
- ...es to include news like new datasets, proposed changes/forthcoming data or model changes please let me know by the end of today (August 5th). Apologies for *Model Changes:2 KB (298 words) - 16:32, 5 August 2021
- [[WormBase Models]] == Model ==7 KB (712 words) - 10:40, 4 October 2010
- ==Antibody Model== ?Antibody Summary UNIQUE ?Text #Evidence21 KB (2,888 words) - 19:58, 9 April 2021
- <pre>New release of WormBase WS192, Wormpep192 and Wormrna192 Tue Jun 24 11:23:32 BST 2008 [[../../../../index.php/Release_notes|http://www.wormbase.org/wiki/index.php/Release_notes]]6 KB (763 words) - 10:43, 21 December 2011
- = The A - Z of WormBase Models = Document created from [http://cvs.sanger.ac.uk/cgi-bin/viewvc.cgi/wormbase/wspec/models.wrm?root=ensembl&view=markup&pathrev=WS218 WS218] models.16 KB (2,207 words) - 23:06, 9 January 2014
- [[WormBase Models]] == Old Model ==12 KB (1,431 words) - 19:06, 20 March 2012
- == 1. Model changes (Hinxton) == 1a) Variation model sign off7 KB (1,182 words) - 13:50, 20 April 2012
- ...cycle. Please review the file [http://cvs.sanger.ac.uk/cgi-bin/viewvc.cgi/wormbase/wspec/models.wrm?revision=1.376&root=ensembl&view=markup models.wrm] in the Unaffiliated_antibody ?Antibody // New tag4 KB (503 words) - 08:30, 22 June 2012
- ...ontology/evidenceontology The Evidence and Conclusion Ontology] is used in WormBase to record evidence used for assertions in curation data models. ...ence and Conclusion Ontology will be incorporated into a future release of WormBase, aiming for WS278, and is proposed to eventually fully replace ?GO_code.6 KB (834 words) - 17:56, 15 June 2020
- == Interaction Model as of WS231 == ...ed ?Physical_interaction model has also been consolidated into this larger model. Note that #Interaction_info and #Interaction_type have been deprecated.59 KB (8,367 words) - 22:00, 14 December 2018
- * Alignment of the antibody class to Alliance: ...ats and rabbits. Standard practice would create 2 records, one for the rat antibody and one for the rabbit.11 KB (1,782 words) - 17:55, 13 May 2021
- *Yuling should contact FlyBase to make sure they're OK, once he has WormBase SVM working Physical interaction model7 KB (1,064 words) - 19:12, 3 November 2011
- *WormBase curates phenotypes, pathways, etc. *WormBase Process curation could really benefit from GO's adoption of this strategy7 KB (1,019 words) - 20:58, 12 April 2012
- *Prepopulation: Display all (key?) experimental info on gene from WormBase, some Textpresso info like "ABC-1 encodes..." ***Model changes7 KB (1,047 words) - 15:34, 4 April 2013
- <pre>New release of WormBase WS193, Wormpep193 and Wormrna193 Fri Jul 25 22:12:15 BST 2008 http://www.wormbase.org/wiki/index.php/Release_Schedule8 KB (944 words) - 16:52, 21 December 2011
- * https://github.com/WormBase/website/issues/8262 * Expression working group working on LinkML model with Gil (FB)5 KB (670 words) - 16:00, 5 August 2021
- ...ed ?Physical_interaction model has also been consolidated into this larger model. Note that #Interaction_info and #Interaction_type have been deprecated. ...// A regulatory interaction detection technique; Antibody name and details captured in Interactor_info hash53 KB (6,521 words) - 20:51, 7 March 2019
- === GO data model change === * Worm pick holders (pencil grips) with WormBase logos; can they be printed on?7 KB (1,058 words) - 15:32, 2 April 2015
- * Valerio will determine priorities (e.g. antibody stuff first), and send issues to curators as needed * Since they are thinking about simple things that can be offered in wormbase, I will also briefly talk about this dashboard that i made for a UCLA group5 KB (873 words) - 14:41, 4 February 2021
- * Maybe have clade-specific descriptions based on the popular model (worms based on C. elegans); may be provided in MOD portal page(s) ...ki, EMBL-EBI, A whistle-stop tour of all the types of data you can find in WormBase5 KB (670 words) - 15:31, 3 June 2021
- New release of WormBase WS232 WS232 was built by Michael Paulini [michael.paulini@wormbase.org]15 KB (1,729 words) - 14:15, 13 September 2012
- ...ZCX1hZ3b-vDdWB4KjIvieALc_GLnYqYCTqnMaJ7Rg/edit (Need to be logged in with WormBase google account to edit it). === WormBase Workshop roll call ===9 KB (1,431 words) - 23:32, 23 June 2015
- * First draft up on WormBase development site === Expr_pattern model change ===8 KB (1,289 words) - 18:11, 10 November 2016
- -rwxrwxr-x 1 todd wormbase 20053 Jul 6 14:06 cell.cgi -rwxrwxr-x 1 todd wormbase 3916 Jul 6 14:06 make_pedigree.cgi16 KB (1,576 words) - 17:44, 16 August 2010
- ...ibing an interactor entity or condition that does not fall into a standard WormBase category Antibody // A regulatory interaction detection technique; Antibody name and details captured in Interactor_info hash50 KB (5,228 words) - 15:10, 21 July 2017
- *What would WormBase look like without any manually curated data? *Interaction model changed to update genetic interaction terms8 KB (1,225 words) - 16:33, 3 October 2013
- === WormBase Ontology Browser (WOBr) === === ?Expr_pattern and ?Movie model changes ===13 KB (1,983 words) - 16:40, 7 November 2013
- ='''WormBase Gene Ontology Progress Report, December 2011'''= Developer, WormBase, Caltech, Pasadena, CA.13 KB (1,830 words) - 16:40, 13 December 2012
- * Trained a small GPT model with C. elegans literature. Reporting some results. ** Current data model at the ABC has negated as a Boolean (true/false).36 KB (4,994 words) - 17:27, 14 February 2024
- *We should make an announcement on the main WormBase page that WormMart will remain at WS220 and Intermine will replace it *Mark Blaxter offered to donate his Brugia database into WormBase10 KB (1,553 words) - 18:04, 7 February 2013
- == Model changes for WS244 == * This cycle we see 5 model changes in 4 classes:235 KB (23,325 words) - 10:33, 3 July 2014
- Current model (WS280) Type Antibody ?Text104 KB (15,303 words) - 19:39, 11 May 2023
- ...ww.wormbase.org/about/Frequently_asked_questions FAQ pages] on the new www.wormbase.org site. === How should I cite WormBase? ===67 KB (10,954 words) - 09:22, 19 February 2013
- http://cvs.sanger.ac.uk/cgi-bin/viewvc.cgi/wormbase/wspec/models.wrm?root=ensembl&view=log ...ng the format Exprnnnn where n is a number; these values correspond to the WormBase ID of the Expr_pattern object; individual entries are comma-separated.47 KB (6,852 words) - 04:27, 8 December 2020
- Karen Yook/WormBase-Caltech/@wbperson712 financial reporting: business model before (subjective) - now quants (big data trends)37 KB (5,533 words) - 19:17, 11 April 2014
- Karen Yook/WormBase-Caltech/@wbperson712 financial reporting: business model before (subjective) - now quants (big data trends)37 KB (5,533 words) - 19:17, 11 April 2014
- ...l traits such as gene expression patterns and neuronal connectivity. Also, WormBase contains sequence and gene structures of C. briggsae and C. remanei, two cl ...n of WormBase available in September, 2005 (WS147 release; BioPerl/Generic Model Organism Database software).103 KB (16,375 words) - 23:39, 30 November 2010
- ==Picture Data Model== ...ta from the literature and individual laboratories and display them in the WormBase gene expression page.120 KB (19,719 words) - 16:44, 20 October 2023
