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  • * As one-offs, Raymond can take newly generated GAFs from curators and process for testing. * Raymond updated all servers/machines
    10 KB (1,474 words) - 15:54, 30 April 2014
  • *Anatomy_term -Raymond Raymond suggested to leave the sex distinction out of the ontology. We are therefor
    14 KB (2,213 words) - 19:26, 12 February 2019
  • ''Raymond: should we have 3 letter codes for phenotypes? Agreed this would be good su
    4 KB (597 words) - 18:34, 31 October 2012
  • * Decided to put data on FTP. Daniela, Sibyl, Raymond will set up a meeting with Seth to get further insight of raw data and on h
    4 KB (576 words) - 16:28, 17 June 2021
  • | Remove (raymond) | Remove (raymond)
    35 KB (4,174 words) - 10:52, 2 February 2015
  • * CenGen has a weekly call: have invited Wen, Daniela, and Raymond ** MovieURL -> 32 - Mohler -> move to movies -> talk again with Raymond
    9 KB (1,377 words) - 16:36, 4 March 2021
  • * Tools? Raymond can bring up enrichment analysis * Raymond trying to use the SObA approach to display logically defined phenotype term
    8 KB (1,189 words) - 14:10, 5 July 2018
  • :cell/other-name (919 values, 0 evidence -- Raymond suggests killing this class?)
    7 KB (604 words) - 18:21, 11 November 2014
  • ...een RO terms and GO - shouldn't be a major issue to have them in datomic. (Raymond): Make sure that there are enough query tools for datomic for curators to r
    4 KB (691 words) - 17:16, 21 June 2018
  • ...etting settled; Paul will find out who is managing the server room and let Raymond know * Raymond fixed; now Spica, wobr and wobr2 are back up
    11 KB (1,782 words) - 17:55, 13 May 2021
  • * Raymond: Don't know the SSL details; has made Caltech machines using SSL layer * Juancarlos, Raymond, Sibyl, and Todd will discuss later (Slack channel?)
    11 KB (1,703 words) - 15:27, 5 April 2018
  • * Raymond: XCO, experimental condition ontology * Daniela, Raymond, Chris working on importing existing cell and anatomy object images into WB
    8 KB (1,224 words) - 15:34, 21 July 2016
  • * Raymond will look into the exposed URL from forwarding.
    5 KB (732 words) - 14:46, 29 April 2016
  • Raymond
    4 KB (650 words) - 17:08, 1 September 2011
  • * Raymond, Chris interested * Raymond has upgraded OS from 8-year old OS, beefed up hardware
    9 KB (1,369 words) - 22:47, 5 August 2020
  • ** Wen, Raymond, and David should discuss * Raymond will discuss with Juancarlos to centralize
    12 KB (1,809 words) - 16:33, 1 March 2018
  • ** Start a cronjob to check for network connections? Already set up (Raymond) * Raymond reporting on meeting with Scott Emmons and neural connectivity data
    10 KB (1,547 words) - 21:31, 2 January 2024
  • * Anatomy & Cells - Raymond
    4 KB (610 words) - 13:12, 14 November 2014
  • * Juancarlos and Raymond working on
    4 KB (604 words) - 15:28, 5 May 2016
  • *Discussion between Raymond, Wen, Daniela, etc.
    4 KB (612 words) - 17:13, 1 December 2011
  • ...types/results are discussed for more than 100 RNAi experiments||''"yes"''||raymond@its.caltech.edu ...mutant rescue ||''"p.580"''; ''"yes"''; ''"fig2"''; ''"daf-16 mosaic"'' ||raymond@its.caltech.edu
    21 KB (3,156 words) - 23:03, 13 August 2010
  • * Raymond prepared to give short talk on SObA to the Alliance group
    4 KB (694 words) - 21:33, 19 December 2019
  • Raymond suggests : To have a first pass form for curators that shows author's
    6 KB (1,045 words) - 21:14, 24 September 2010
  • |Raymond Lee |Raymond
    12 KB (1,663 words) - 16:28, 9 October 2023
  • * Raymond and Juancarlos have been working on
    5 KB (701 words) - 15:38, 4 June 2020
  • ...criptome datasets. A gold-standard set of markers needs to be implemented.[Raymond, Daniela] ...s for working closer with WormAtlas on this issue. [see also Q4] [Paul S., Raymond, Lincoln, Todd?]
    11 KB (1,649 words) - 16:10, 19 July 2018
  • * Raymond requests that people take a look and send feedback
    5 KB (715 words) - 15:49, 4 August 2016
  • ...en a set of genes, find commonalities in (for example) anatomy– Wen and/or Raymond will address this in their talks.
    5 KB (763 words) - 00:51, 19 September 2014
  • * Raymond considering submitting abstract ...WormBase needs to set up our own AWS and SGD can give us their code. Will Raymond be able to help set up the AWS? Once installing the AWS SPELL following SGD
    14 KB (2,226 words) - 15:31, 7 June 2018
  • * Raymond and Juancarlos are working on a display of genes that may be exclusively ex * Raymond & Juancarlos working on final details
    10 KB (1,464 words) - 17:09, 13 August 2015
  • Raymond suggests : To have a first pass form for curators that shows author's
    6 KB (1,024 words) - 23:02, 13 August 2010
  • * Anatomy function model: Proposal to make Remark entry unique; Raymond asking to remove the UNIQUE in the model * Raymond: Cell Press taking in tables of reagents with URLs; we should make sure tha
    11 KB (1,664 words) - 16:29, 7 December 2017
  • ** SObA? (Raymond); still working on multi-species SObA
    5 KB (747 words) - 16:31, 5 December 2019
  • *Curation stats per paper (Raymond): write comments in a remark field; traceable, transparent, available
    5 KB (843 words) - 17:26, 1 November 2012
  • ** Raymond and Juancarlos figuring out web code structure
    6 KB (823 words) - 19:38, 2 January 2014
  • Igor/Raymond
    8 KB (820 words) - 10:51, 21 December 2011
  • * Raymond and Juancarlos have worked out a way to display top-slicing of the ontology ...with top slicing function. You can try it here <http://wobr2.caltech.edu/~raymond/cgi-bin/soba_biggo.cgi> by entering the name of your favorite gene.
    6 KB (910 words) - 16:43, 7 March 2019
  • |No API needed at this time. Ask Raymond about this class.
    12 KB (1,559 words) - 18:14, 15 June 2011
  • * Raymond working on addressing warnings and errors (missing definitions, duplicate l
    7 KB (1,044 words) - 14:45, 8 October 2020
  • **Raymond tried to install a 64-bit machine (free); wouldn't work
    7 KB (1,070 words) - 17:47, 1 March 2012
  • *Raymond stabilized Elbrus
    7 KB (1,117 words) - 16:39, 4 August 2011
  • * Raymond: lots of neuro data
    8 KB (1,213 words) - 15:29, 6 July 2017
  • ...p://www.wormbase.org/species/c_elegans/gene/WBGene00000898#-bc-10 SObA]) - Raymond
    8 KB (1,130 words) - 13:27, 4 February 2016
  • *''' Anatomy/cell''' -> ''acedb on spica'' with corrections by Raymond ; Summary of anatomy ontology term<br>
    10 KB (1,696 words) - 17:21, 25 July 2013
  • ** Raymond: The throughput will be handled appropriately depending on demand; priority
    8 KB (1,121 words) - 14:01, 15 July 2019
  • ...o see how the sentences look, will feedback any ontology related issues to Raymond
    9 KB (1,366 words) - 15:19, 6 September 2018
  • * Raymond: want to use design pattern strategy to curate
    9 KB (1,364 words) - 15:39, 7 February 2019
  • Raymond - CMS system is designed for this, but we would need to set that up == Wen Raymond fixed the link-outs to these sites, not updated on the site yet<br>
    36 KB (4,994 words) - 17:27, 14 February 2024
  • * Juancarlos & Raymond will continue to work on Cytoscape view for another month, then we will mak
    10 KB (1,475 words) - 16:57, 5 November 2015
  • ** Raymond: simply set up forwarding at our end?
    9 KB (1,375 words) - 16:04, 18 April 2024
  • * Raymond gave an update on WObr. Juancarlos has learned enough Catalyst to create a
    10 KB (1,583 words) - 18:16, 5 February 2014
  • ** http://131.215.12.204/~raymond/cgi-bin/soba_go_hs.cgi?action=annotSummaryCytoscape&focusTermId=UniProtKB:O * Server that Raymond used originally is not appropriate
    10 KB (1,527 words) - 15:32, 6 April 2017
  • ...n/dump_from_ws/files/ are generated by Wen and uploaded here. Valerio and Raymond will try to set up a cronjob to update WS on dockerized tazendra so that it
    18 KB (2,743 words) - 17:14, 16 March 2023
  • ...hris<br>two12884 - Snehalata Kadam<br>two324 - Ranjana Kishore<br>two363 - Raymond Lee<br>two1 - Cecilia Nakamura<br>two480 - Tuco<br>two12028 - Daniela Racit
    20 KB (3,050 words) - 21:01, 19 April 2017
  • After brainstorming (people involved Xiaodong, Raymond, Wen, Daniela) we agreed the current Expr_model can accommodate most of the
    24 KB (3,538 words) - 17:50, 15 December 2015
  • ...verified it, either the actual person, Cecilia if she did it manually, or Raymond if verified by the script that connects by labs or lineage.
    25 KB (3,238 words) - 16:42, 8 November 2019
  • * Color index : Verified YES Cecilia (blue), Verified YES Raymond (purple), Verified YES (green), Verified NO (red), Verified YES to Other po *** If not verified by author_id ne (no equal) 'two363' (Raymond, by script).
    119 KB (18,888 words) - 00:05, 2 May 2014
  • --[[User:Raymond|Raymond]] 13:01, 14 July 2009 (EDT) /// out dated (Raymond 20080214) /// From the "advanced query" WormBase page, construct the follow
    67 KB (10,954 words) - 09:22, 19 February 2013
  • ...but is anyway kind of weird. I spoke with Wen (who curated the data) and Raymond and we came up with the following consensus: we should associate to all tho ...rom Flickr and there are still some issues I have to resolve with Todd and Raymond. Thanks! D What do you mean by keeping a hold on existing picture object ?
    120 KB (19,719 words) - 16:44, 20 October 2023
  • --[[User:Raymond|Raymond]] 12 Apr 2018
    177 KB (27,819 words) - 16:59, 12 April 2018
  • ''WormBook's WormMethod chapter by Raymond Lee containing core web resources for C. elegans research''
    103 KB (16,375 words) - 23:39, 30 November 2010

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