Difference between revisions of "WormBase-Caltech Weekly Calls"
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=== Phenotypes === | === Phenotypes === | ||
| − | * Will be good to compare phenotypes across DBs | + | * Will be good to be able to compare phenotypes across DBs |
| − | * Phenologs | + | * Is there a working list of Phenologs anywhere? See Ed Marcotte's paper |
| + | * Monarch/phenopackets, Chris M talks next week | ||
| + | * Uberon; phenotype-anatomy associations in WB could be associated with Uberon anatomy terms | ||
=== GO annotation model === | === GO annotation model === | ||
| Line 52: | Line 54: | ||
=== WBPerson lineage graph === | === WBPerson lineage graph === | ||
* Raymond requests that people take a look and send feedback | * Raymond requests that people take a look and send feedback | ||
| + | * It's not clear right now where this is intended to be displayed | ||
=== Web Phenote being resurrected === | === Web Phenote being resurrected === | ||
* We should talk to WebPhenote people to discuss our existing OA features | * We should talk to WebPhenote people to discuss our existing OA features | ||
Revision as of 17:09, 21 July 2016
Contents
Previous Years
2016 Meetings
July 21, 2016
Yuling leaving in August
- Will send out announcements to hire a replacement
- Will take time to get back up to speed
- Curators should address concerns before he leaves (documentation, SVM stuff, etc.)
AGR curator call
- Yesterday we (FlyBase, ZFIN, and WormBase) presented paper curation status tracking
- Chris Mungall will discuss phenopackets next week
Phenotypes
- Will be good to be able to compare phenotypes across DBs
- Is there a working list of Phenologs anywhere? See Ed Marcotte's paper
- Monarch/phenopackets, Chris M talks next week
- Uberon; phenotype-anatomy associations in WB could be associated with Uberon anatomy terms
GO annotation model
- Common GAF was an impetus, but were other reasons
- ACE format couldn't accommodate some aspects of GO annotations
- Ranjana considering similar model for disease annotations
WBPerson lineage graph
- Raymond requests that people take a look and send feedback
- It's not clear right now where this is intended to be displayed
Web Phenote being resurrected
- We should talk to WebPhenote people to discuss our existing OA features
