WormBase-Caltech Weekly Calls
From WormBaseWiki
Previous Years
2017 Meetings
July 6, 2017
Noctua
- Use for all literature curation in future?
- We would need to see how it could be used for all data types
- We would also want a full-time developer working on Noctua; maybe bring Juancarlos into the project
SPELL
- SPELL related data - how to deal with?
- Data: recalculated, mapping, results dependent on SPELL
- Analysis (clustering tool): clunky, freezes w/limited resources
- Wen will work with Juancarlos to generate a SimpleMine-like tool for downloading data sets
- Wen has to remove log files to make space on machine
- ~360 data sets
- Current virtual machine has 10G memory; is becoming limiting
- SPELL has lots of dependencies; difficult to account for them all when building SPELL
- Would be good if we could setup a new (larger) virtual machine to run SPELL; how much time/resources do we want to spend on it?