WormBase-Caltech Weekly Calls
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Previous Years
2017 Meetings
May 4, 2017
Strategies for GO-CAM (Noctua) curation
- GO-CAM (Gene Ontology - Causal Activity Model(ing))
- Proposal for curation report page (Kimberly)
- Paper-by-paper approach vs. big-picture approach
- Kimberly presented proposal for curation tool:
- Given a list of genes and keywords, tool could pull up all relevant annotations to help start with GO CAM model building
- Tool could return GO annotations, expression patterns, phenotypes, interaction-based phenotypes, etc.
- Could have a table to fill out that could then be imported into Noctua
- Can we use SObA to visualize relevant annotations for a set of genes? Help visualize common vs. distinct annotations?
- Process could highlight the need for micropublications
GO SObA
- Raymond & Juancarlos have been working on autocomplete tool for search bar; not trivial