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May 4, 2017

Strategies for GO-CAM (Noctua) curation

• GO-CAM (Gene Ontology - Causal Activity Model(ing))
• Proposal for curation report page (Kimberly)
• Paper-by-paper approach vs. big-picture approach
• Kimberly presented proposal for curation tool:
  • Given a list of genes and keywords, tool could pull up all relevant annotations to help start with GO CAM model building
  • Tool could return GO annotations, expression patterns, phenotypes, interaction-based phenotypes, etc.
• Could have a table to fill out that could then be imported into Noctua
• Can we use SObA to visualize relevant annotations for a set of genes? Help visualize common vs. distinct annotations?
• Process could highlight the need for micropublications

GO SObA

• Raymond & Juancarlos have been working on autocomplete tool for search bar; not trivial