Difference between revisions of "WormBase-Caltech Weekly Calls"
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=== AGR Press Release === | === AGR Press Release === | ||
* Discussed briefly at AGR all-hands call yesterday | * Discussed briefly at AGR all-hands call yesterday | ||
+ | * No one on the call had much info | ||
* Ranjana can post on WB blog on Oct 20th (or earlier?) | * Ranjana can post on WB blog on Oct 20th (or earlier?) | ||
* Will ask Stacia | * Will ask Stacia |
Revision as of 16:35, 5 October 2017
Contents
Previous Years
2017 Meetings
October 5, 2017
NAR Paper
- Raymond will send around reviews
Mary Ann's transition
- Cecilia will take over laboratory curation
- Hinxton (Paul Davis) will take over nomenclature work
- Hinxton will take over strain info, Mitani (NBP) alleles, sequence features (large scale)
- Sequence feature curation (literature-based, small-scale) will move to Caltech
- Molecule curation may be split; Hinxton could coordinate with ChEBI; GO-CAM modeling molecules handled at Caltech?
- SOP? Karen wrote Wiki pages for molecule curation; she will look them over and can review with others
- Metabolomics was recent big push (biggest effort needed); need to discuss with Michael Witting
AGR Press Release
- Discussed briefly at AGR all-hands call yesterday
- No one on the call had much info
- Ranjana can post on WB blog on Oct 20th (or earlier?)
- Will ask Stacia
AGR momentum
- AGR disease working group
- Lots going on, a lot of progress, still have much to discuss
- Next need to work out how to pull in new data objects like alleles, strains, genotypes, etc.
- Will need to establish a basic, consensus AGR data model for these data types/objects
- How is AGR disease data display compared to WB/MODs? WB is generally (as are other MODs) ahead of AGR
- Site-visit
- PIs go to D.C. to discuss AGR
- Wen working on lab meeting presentations; will present AGR progress, give tutorial
- Raymond working on methods paper for SObA display
- Raymond will start working on neural functional units with phenotype
Sequence feature curation
- Really need to encourage authors to submit tables with specific sequence feature info
- Need to make the data submission process easy, user-friendly
- Karen looking into it
- Work study jobs for students to curate? May not be preferred job for students
- Temp jobs may be the way to go; but learning curve needs to be very short