Difference between revisions of "WormBase-Caltech Weekly Calls"
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* Small boxes of mints? | * Small boxes of mints? | ||
* Will need to decide soon to have enough time for ordering | * Will need to decide soon to have enough time for ordering | ||
+ | |||
+ | === Phenotype modeling === | ||
+ | * Chris still working on ?Phenotype_assay (?Phenotype_experiment/?Phenotype_annotation) class model | ||
+ | * May require a new OA that supersedes the Phenotype OA and RNAi OA | ||
+ | * The new model still requires the #Phenotype_info hash as long as we still want to make assertions (e.g. loss-of-function, gain-of-function, recessive, dominant) about specific perturbations (e.g. variations) in the context of the phenotype experiment | ||
+ | * Have tried to pull penetrance info out of the #Phenotype_info hash and into the ?Phenotype_assay model, but this would require only ever having one phenotype (or one set of phenotypes) with penetrance values per experiment |
Revision as of 18:23, 1 June 2017
Contents
Previous Years
2017 Meetings
June 1, 2017
Upload
- After worm meeting, (June 27th)
IWM swag
- Rubber bracelets?
- Left over bandanas? paid ~$1 per bandana before. We have enough for WormBase staff
- Water bottles?
- Small boxes of mints?
- Will need to decide soon to have enough time for ordering
Phenotype modeling
- Chris still working on ?Phenotype_assay (?Phenotype_experiment/?Phenotype_annotation) class model
- May require a new OA that supersedes the Phenotype OA and RNAi OA
- The new model still requires the #Phenotype_info hash as long as we still want to make assertions (e.g. loss-of-function, gain-of-function, recessive, dominant) about specific perturbations (e.g. variations) in the context of the phenotype experiment
- Have tried to pull penetrance info out of the #Phenotype_info hash and into the ?Phenotype_assay model, but this would require only ever having one phenotype (or one set of phenotypes) with penetrance values per experiment