Difference between revisions of "WormBase-Caltech Weekly Calls"
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== March 1, 2017 == | == March 1, 2017 == | ||
| − | === | + | === Expression Cluster SVM === |
| + | * Started curating expression clusters in 2007 | ||
| + | * Had been using text pattern match to identify expression cluster papers | ||
| + | * Now with more papers for positive and negative training set, shifting to SVM identification | ||
| + | * 540 positive papers, 900 negative papers for training | ||
| + | * Wen received first batch, roughly ~70% precision, possibly ~80-90% recall | ||
| + | * Wen reviewed papers from WormEXP (http://wormexp.zoologie.uni-kiel.de/wormexp/) | ||
Revision as of 17:19, 2 March 2017
Previous Years
2017 Meetings
March 1, 2017
Expression Cluster SVM
- Started curating expression clusters in 2007
- Had been using text pattern match to identify expression cluster papers
- Now with more papers for positive and negative training set, shifting to SVM identification
- 540 positive papers, 900 negative papers for training
- Wen received first batch, roughly ~70% precision, possibly ~80-90% recall
- Wen reviewed papers from WormEXP (http://wormexp.zoologie.uni-kiel.de/wormexp/)
