Difference between revisions of "WormBase-Caltech Weekly Calls"
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* Need to emphasize the importance of MODs and why they need support | * Need to emphasize the importance of MODs and why they need support | ||
* We should cater our discussions to what the labs specifically work on | * We should cater our discussions to what the labs specifically work on | ||
+ | * Could start with 2-4 days of trial; half-day at campuses | ||
+ | * Needs to be short talk/seminar (not an hour, much shorter) | ||
+ | * Should we go to local/area meetings | ||
+ | * Will likely be effective to have one-on-one discussions with PIs, lab members |
Revision as of 16:59, 1 October 2015
Contents
Previous Years
2015 Meetings
October 1, 2015
Micropublications
- General discussion on DOI handling for micropublications and using the ?Paper model
- Project started with expression pattern submissions
- Micropublications were displayed on ?Expr_pattern pages on WormBase/WormBook
- Question is how to request/assign a DOI to these URLs/pages
- May be enough to request a DOI for WormBook, with just a link to the respective WormBase page
- Daniela has requested changes to ?Expr_pattern model to accommodate micropublication
- So many of the tags were shared (or could be shared) with the ?Paper class
- If micropublications will be indexed by MEDLINE, we could use our standard paper pipeline to capture paper data
- Any lag in indexing is likely negligible (~1 day)
- Daniela & Paul asked NLM to change the title of WormBook from "WormBook: An online review of C. elegans biology" to just "WormBook" to accommodate a broader scope; haven't heard back yet
Community Curation paper
- Due at end of October
- Daniela communicating with Mary Ann; should micropublications be mentioned?
- Database issue that is published concurrently with the BioCurator meeting
- Hopefully we have some feedback by the time we need to make revisions (end of January)
- E-mails to authors for concise description and allele-phenotype will go out today/soon
WS251 citace upload tomorrow
Community editing of concise descriptions
- Would like community to edit manually-written and automated gene descriptions
- Would be nice to have a link to the concise description form from gene overview/existing description
- Same for allele-phenotype form
Traveling to labs
- Soliciting community contributions AND providing user help/guidance
- Need to emphasize the importance of MODs and why they need support
- We should cater our discussions to what the labs specifically work on
- Could start with 2-4 days of trial; half-day at campuses
- Needs to be short talk/seminar (not an hour, much shorter)
- Should we go to local/area meetings
- Will likely be effective to have one-on-one discussions with PIs, lab members