Difference between revisions of "WormBase-Caltech Weekly Calls"
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* Wen received first batch, roughly ~70% precision, possibly ~80-90% recall | * Wen received first batch, roughly ~70% precision, possibly ~80-90% recall | ||
* Wen reviewed papers from WormEXP (http://wormexp.zoologie.uni-kiel.de/wormexp/) | * Wen reviewed papers from WormEXP (http://wormexp.zoologie.uni-kiel.de/wormexp/) | ||
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| + | === Karen's SBIR grant === | ||
| + | * Looks like it will get funded | ||
| + | * Karen will need to become part time at WormBase | ||
| + | * Paul put in a request for posting another curator position | ||
Revision as of 17:21, 2 March 2017
Contents
Previous Years
2017 Meetings
March 1, 2017
Expression Cluster SVM
- Started curating expression clusters in 2007
- Had been using text pattern match to identify expression cluster papers
- Now with more papers for positive and negative training set, shifting to SVM identification
- 540 positive papers, 900 negative papers for training
- Wen received first batch, roughly ~70% precision, possibly ~80-90% recall
- Wen reviewed papers from WormEXP (http://wormexp.zoologie.uni-kiel.de/wormexp/)
Karen's SBIR grant
- Looks like it will get funded
- Karen will need to become part time at WormBase
- Paul put in a request for posting another curator position
