Difference between revisions of "WormBase-Caltech Weekly Calls"
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* Topics in SPELL need some organization, possibly trimming | * Topics in SPELL need some organization, possibly trimming | ||
* We could create a graph (SObA) display of topics (based on GO process) | * We could create a graph (SObA) display of topics (based on GO process) | ||
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| + | === SPELL problem with WS265 === | ||
| + | * Wen had to debug; SPELL has limit of how many genes can be processed per data set (~50,000) | ||
| + | * Wen trying to accommodate, deleting some genes from data set that had no expression (kludge) | ||
Revision as of 15:58, 3 May 2018
Contents
Previous Years
GoToMeeting link: https://www.gotomeet.me/wormbase1
2018 Meetings
May 3, 2018
SimpleMine output
- Wen was working on simplification of SimpleMine output
- Considering removing general terms in an ontology when more specific terms exist
- Concern that we would be removing information; will keep terms
SPELL topics
- Topics in SPELL need some organization, possibly trimming
- We could create a graph (SObA) display of topics (based on GO process)
SPELL problem with WS265
- Wen had to debug; SPELL has limit of how many genes can be processed per data set (~50,000)
- Wen trying to accommodate, deleting some genes from data set that had no expression (kludge)
