Difference between revisions of "WormBase-Caltech Weekly Calls"
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*Propose adding the Variation-Gene connections to Name Server | *Propose adding the Variation-Gene connections to Name Server | ||
*Can we (Caltech) mirror/copy GeneAce locally? Fire wall issues | *Can we (Caltech) mirror/copy GeneAce locally? Fire wall issues | ||
+ | *Store MySQL databases on the cloud? Bypass fire walls? Maybe for long term plan |
Revision as of 16:59, 4 April 2013
2013 Meetings
April 4, 2013
IWM 2013
- Abstracts for posters (6 posters total)
- WormBase booth with desks and poster space
- How is the space going to be configured?
- Will there be enough space?
- Projector? Need space to project
- Standing tables instead of desks
IWM Promotional ideas
- Recycle ideas/items
- See what we have in stock
- Temporary tattoos?
- SPlit cost with GSA?
- Mugs?
- Triangular worm pick/pencil grip
Expression pattern, personal communication
- Can we include expression patterns from WormBook (Oliver & Cori Bargmann: Chris Lee?)
- Can we put description in WormBase?
- Neuropeptide expression pattern;
- Normally we don't curate from reviews
- Best to contact Chris Lee, check with her about expression pattern
- Amend/Edit expression pattern as appropriate
Function, Human Disease poster
- Concise description
- GO terms
- Phenotypes (RNAi- and variation-based)
- Anatomy: site of action and anatomy function
Variation list
- Handling large number of variations in OA
- Generating list of variations likely to be attributed with phenotypes
- Table maker vs Scripts?
- Variation data from GeneAce, how frequently updated? Real time?
- Get new variations from Variation Name Server, not GeneAce
- Is it worth trying to get daily updates?
- Name Server: get Variation & Gene info from
- Propose adding the Variation-Gene connections to Name Server
- Can we (Caltech) mirror/copy GeneAce locally? Fire wall issues
- Store MySQL databases on the cloud? Bypass fire walls? Maybe for long term plan