Difference between revisions of "WormBase-Caltech Weekly Calls"
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*Can build queries with a query builder and perform complex queries | *Can build queries with a query builder and perform complex queries | ||
*Precanned queries could be made and proposed to users | *Precanned queries could be made and proposed to users | ||
+ | *Curators can try YeastMine or FlyMine to try it out | ||
+ | |||
+ | |||
+ | Species expression data from Itai Yanai | ||
+ | *Importing pictures; potentially flagging each to a particular species | ||
+ | *Pictures typically linked to Expr_pattern objects | ||
+ | *Can images be linked to sequences, rather than gene objects? |
Revision as of 17:28, 10 January 2013
January 10, 2013
Site-of-action pages
- No cell function pages exist
- Tried to display cell function info on anatomy pages
- Trying to display site-of-action data on relevant gene pages
Process pages
- Rudimentary process page up
- Has overview widget with all relevant entities
- Should be something by SAB
Intermine
- JD is working on; should have something ready by SAB
- Will replace WormMart entirely
- We should make an announcement on the main WormBase page that WormMart will remain at WS220 and Intermine will replace it
- We can perform queries for users in the meantime, if necessary
- Intermine interface isn't very intuitive; maybe we can improve it in time
- Can build queries with a query builder and perform complex queries
- Precanned queries could be made and proposed to users
- Curators can try YeastMine or FlyMine to try it out
Species expression data from Itai Yanai
- Importing pictures; potentially flagging each to a particular species
- Pictures typically linked to Expr_pattern objects
- Can images be linked to sequences, rather than gene objects?