Difference between revisions of "WormBase-Caltech Weekly Calls"

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= January 10, 2013 =
 
= January 10, 2013 =
 +
 +
 +
Site-of-action pages
 +
*No cell function pages exist
 +
*Tried to display cell function info on anatomy pages
 +
*Trying to display site-of-action data on relevant gene pages
 +
 +
 +
Process pages
 +
*Rudimentary process page up
 +
*Has overview widget with all relevant entities
 +
*Should be something by SAB
 +
 +
 +
Intermine
 +
*JD is working on; should have something ready by SAB
 +
*Will replace WormMart entirely
 +
*We should make an announcement on the main WormBase page that WormBase will remain at WS220 and Intermine will replace it
 +
*We can perform queries for users in the meantime, if necessary
 +
*Intermine interface isn't very intuitive; maybe we can improve it in time
 +
*Can build queries with a query builder and perform complex queries
 +
*Precanned queries could be made and proposed to users

Revision as of 17:22, 10 January 2013

2009 Meetings

2011 Meetings

2012 Meetings


January 10, 2013

Site-of-action pages

  • No cell function pages exist
  • Tried to display cell function info on anatomy pages
  • Trying to display site-of-action data on relevant gene pages


Process pages

  • Rudimentary process page up
  • Has overview widget with all relevant entities
  • Should be something by SAB


Intermine

  • JD is working on; should have something ready by SAB
  • Will replace WormMart entirely
  • We should make an announcement on the main WormBase page that WormBase will remain at WS220 and Intermine will replace it
  • We can perform queries for users in the meantime, if necessary
  • Intermine interface isn't very intuitive; maybe we can improve it in time
  • Can build queries with a query builder and perform complex queries
  • Precanned queries could be made and proposed to users