Difference between revisions of "WormBase-Caltech Weekly Calls"

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***Anatomy with respect to life stage
 
***Anatomy with respect to life stage
 
***Multiple species
 
***Multiple species
***[http://www.obofoundry.org/wiki/index.php/UBERON:Main_Page | Uberon] framework can be adapted for multiple species  
+
***[http://www.obofoundry.org/wiki/index.php/UBERON:Main_Page Uberon] framework can be adapted for multiple species  
  
  

Revision as of 16:33, 2 August 2012

2009 Meetings

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2012 Meetings

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July


August 2, 2012

Grant updates

  • Topics
    • Diseases
    • Worm Phenotype ontology; attempt applying to other species? Some has been done already (e.g. C. briggsae)
      • Benefit of curating phenotypes in other species? Particularly useful for genes not in C. elegans, for example
    • Textpresso for nematodes
      • >5000 papers now
      • Complete set of papers by ~Labor Day
    • Anatomy ontology
      • Anatomy page is hub for data
      • Upcoming challenge - male/female/hermaphrodite divergence
      • Anatomy with respect to life stage
      • Multiple species
      • Uberon framework can be adapted for multiple species


  • Suggestions for future
    • Better integration across data types
    • How the OA can evolve and what it can be used for?