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• UserGuide:Revised Nomenclature
  .../p><h2>Genomes, assemblies, clones and contigs</h2><p>Reference genomes in WormBase are given version names, for example <i>C. elegans</i> has the version name ...<b>AscSuum_1.0</b> and <b>ASU_2.0</b></p><p>The genomes of most species in WormBase are incompletely assembled, being left as various sizes of contig. Only <i>
  56 KB (9,514 words) - 09:48, 23 October 2015
• WormBase-Caltech Weekly Calls September 2013
  *Examples: CDS to Pseudogene changes, gene-to-variation mappings/pairings *What would WormBase look like without any manually curated data?
  8 KB (1,225 words) - 16:33, 3 October 2013
• Working Group:Sequence Features
  ** See github ticket 2867 https://github.com/WormBase/website/issues/2867#issuecomment-48041365 *** How many new objects did you add to WormBase
  23 KB (3,248 words) - 12:58, 22 September 2014
• RNAi
  == RNAi Data Model == This is the ?RNAi data model as of WormBase Release WS251:
  29 KB (4,152 words) - 20:29, 30 July 2019
• Gene Interaction
  ...ed ?Physical_interaction model has also been consolidated into this larger model. Note that #Interaction_info and #Interaction_type have been deprecated. ...Interactor_overlapping_CDS ?CDS XREF Interaction #Interactor_info // CDS of the interacting gene or protein (or related sequence)
  53 KB (6,521 words) - 20:51, 7 March 2019
• FAQs
  ...ww.wormbase.org/about/Frequently_asked_questions FAQ pages] on the new www.wormbase.org site. === How should I cite WormBase? ===
  67 KB (10,954 words) - 09:22, 19 February 2013
• WormBase-Caltech Weekly Calls 2023
  * Trained a small GPT model with C. elegans literature. Reporting some results. ** Current data model at the ABC has negated as a Boolean (true/false).
  36 KB (4,994 words) - 17:27, 14 February 2024
• Gene Regulation
  == Interaction Model as of WS231 == ...ed ?Physical_interaction model has also been consolidated into this larger model. Note that #Interaction_info and #Interaction_type have been deprecated.
  59 KB (8,367 words) - 22:00, 14 December 2018
• Expression Pattern
  Current model (WS280) CDS ?CDS XREF Expr_pattern // for coding genes
  104 KB (15,303 words) - 19:39, 11 May 2023
• Searching WormBase for Information About C. elegans (Wiley)
  ...l traits such as gene expression patterns and neuronal connectivity. Also, WormBase contains sequence and gene structures of C. briggsae and C. remanei, two cl ...n of WormBase available in September, 2005 (WS147 release; BioPerl/Generic Model Organism Database software).
  103 KB (16,375 words) - 23:39, 30 November 2010

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