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Create the page "Transposon CDS" on this wiki! See also the search results found.

• WormBase Model:Transposon
  // ?Transposon class [020128 dl] ?Transposon Evidence #Evidence
  1 KB (129 words) - 09:51, 5 October 2010
• WormBase Model:CDS
  // ?CDS class - To store all coding genes ?CDS Evidence #Evidence
  4 KB (410 words) - 17:08, 17 August 2010
• Unused evidence
  :cds/corresponding-protein (201723 values, 0 evidence) ***** :cds/concise-description EMPTY
  7 KB (604 words) - 18:21, 11 November 2014
• GFF2 features
  | CDS:curated | CDS:Genefinder
  5 KB (650 words) - 23:11, 13 August 2010
• AceDB classes
  * [[WormBase Model:CDS|CDS]] * [[WormBase Model:Transposon|Transposon]]
  4 KB (568 words) - 11:06, 23 May 2011
• WBConfCall 2012.02.02-Agenda and Minutes
  CDS ?CDS ==== ?Transposon, Corresponding_CDS and Corresponding_Pseudogene - Paul ====
  8 KB (879 words) - 09:32, 3 February 2012
• WBConfCall 2012.12.06-Agenda and Minutes
  2 * Transposon gene reactivation - Paul 2.2 Gene::Transposon
  5 KB (752 words) - 18:55, 6 December 2012
• WBConfCall 2012.02.16-Agenda and Minutes
  ==== ?Transposon, Corresponding_CDS and Corresponding_Pseudogene - Paul ==== * PaulD: the Transposon object needs to be connected to the Corresponding_CDS and Corresponding_Pse
  5 KB (800 words) - 10:09, 17 February 2012
• AceOjbect Redesign Page
  | [[WormBase Model:CDS|CDS]] | [[WormBase Model:Transposon|Transposon]]
  12 KB (1,559 words) - 18:14, 15 June 2011
• GFF3 features (C. elegans)
  mRNA:Coding_transcript (ID,Parent,Note,cds,prediction_status,wormpep) CDS (ID,Parent=mRNA ID,Note,status,wormpep)
  19 KB (1,985 words) - 23:13, 13 August 2010
• WS203
  There are 20178 CDS in autoace, 24032 when counting 3853 alternate splice forms. Gene <-> CDS,Transcript,Pseudogene connections
  6 KB (662 words) - 16:50, 21 December 2011
• WormBase Model:Feature
  Associated_with_CDS ?CDS XREF Associated_feature #Evidence // richard Associated_with_transposon ?Transposon XREF Associated_feature #Evidence //richard
  4 KB (394 words) - 08:39, 16 September 2014
• WormBase Model:Sequence
  ...child ?CDS XREF Sequence UNIQUE Int UNIQUE Int #SMap_info // For ?CDS class [031104 krb] Transposon ?Transposon XREF Sequence UNIQUE Int UNIQUE Int #SMap_info // for transposons [02012
  12 KB (1,258 words) - 09:29, 5 October 2010
• WS202
  There are 20181 CDS in autoace, 24029 when counting 3847 alternate splice forms. The differnce between the total CDS's of this (24029) and the last build (23993) does not equal the net change
  6 KB (770 words) - 11:06, 21 December 2011
• WS204
  There are 20184 CDS in autoace, 24052 when counting 3868 alternate splice forms. Gene <-> CDS,Transcript,Pseudogene connections
  6 KB (648 words) - 16:16, 21 December 2011
• WS192
  There are 20193 CDS in autoace, 23814 when counting 3621 alternate splice forms. Gene &lt;-&gt; CDS,Transcript,Pseudogene connections
  6 KB (763 words) - 10:43, 21 December 2011
• WS206
  There are 20209 CDS in autoace, 24143 when counting 3934 alternate splice forms. The differnce between the total CDS's of this (24143) and the last build (24114) does not equal the net change
  7 KB (796 words) - 16:46, 21 December 2011
• WebDev 2013.08.30-Agenda and Minutes
  #1114 - CDS overview for partial CDSs #1082 - Transposon summary page
  2 KB (357 words) - 15:40, 30 August 2013
• Issues-9/24/2013
  * #1082 - transposon family summary pages - JW ** gene/cds/tanscript/phen/exp clus/exp pattern/var/anatomy term/life stage
  3 KB (416 words) - 18:30, 24 September 2013
• Unused Attributes
  | :cds/concise-description | ?CDS
  35 KB (4,174 words) - 10:52, 2 February 2015
• WormBase Models
  | [[WormBase Model:CDS|CDS]] | [[WormBase Model:Transposon|Transposon]]
  16 KB (2,207 words) - 23:06, 9 January 2014
• WS231
  ...SPECIES.WS231.cds_transcripts.fa.gz - Spliced cDNA sequence for the CDS portion of protein-coding transcripts Gene <-> CDS,Transcript,Pseudogene connections
  16 KB (1,820 words) - 14:15, 13 September 2012
• UserGuide:Revised Nomenclature
  ...f clones whose chromosome is not known.</p><h2>CDS and Transcript</h2><p>A CDS (coding sequence structure) is the part of a gene locus that codes for a pr ...by the Sequence Name. The Sequence Name is the name that was given to the CDS or ncRNA Transcript at that locus, but without the letters at the end that
  56 KB (9,514 words) - 09:48, 23 October 2015
• UserGuide:Reivsed Nomenclature
  ...f clones whose chromosome is not known.</p><h2>CDS and Transcript</h2><p>A CDS (coding sequence structure) is the part of a gene locus that codes for a pr ...by the Sequence Name. The Sequence Name is the name that was given to the CDS or ncRNA Transcript at that locus, but without the letters at the end that
  56 KB (9,520 words) - 11:51, 21 October 2015
• Sequence Feature
  Associated_with_CDS ?CDS XREF Associated_feature #Evidence // richard Associated_with_transposon ?Transposon XREF Associated_feature #Evidence //richard
  24 KB (3,538 words) - 17:50, 15 December 2015
• Updating ontology (.obo) files for the OA
  ...select for variations of type allele or those that affect CDS (can include transposon and polymorphism alleles). This is necessary to keep the size of the variat
  10 KB (1,644 words) - 18:48, 13 August 2020
• WS244 Models.wrm
  ...Sequence_name UNIQUE ?Gene_name XREF Sequence_name_for // captures main CDS name without isoforms ...ar_name ?Gene_name XREF Molecular_name_for // for linking to full CDS names, wormpep etc.
  235 KB (23,325 words) - 10:33, 3 July 2014
• Working Group:Sequence Features
  Associated_with_CDS ?CDS XREF Associated_feature #Evidence // richard Associated_with_transposon ?Transposon XREF Associated_feature #Evidence //richard
  23 KB (3,248 words) - 12:58, 22 September 2014
• Expression Pattern
  CDS ?CDS XREF Expr_pattern // for coding genes * CDS
  104 KB (15,303 words) - 19:39, 11 May 2023