Process page mock-ups
From WormBaseWiki
Revision as of 17:46, 8 July 2009 by Psternberg (talk | contribs)
Contents
- 1 Notes for process pages
- 2 Processes in C. elegans
- 2.1 Cell death
- 2.2 Autophagy
- 2.3 Dauer arrest
- 2.4 L1 arrest
- 2.5 Embryonic blastomere specification
- 2.6 Gonad development
- 2.7 Germ line development
- 2.8 Male-specific development
- 2.9 Vulval development
- 2.10 Cell migration
- 2.11 Neuronal regeneration
- 2.12 Neuronal migration
- 2.13 Molting
- 2.14 Cell specification
- 2.15 Axis formation
- 2.16 Chemosensation
- 2.17 Mechanosensation
- 2.18 Behavioral plasticity
- 2.19 Locomotion
- 2.20 Feeding (Pharyngeal pumping)
- 2.21 Defecation
- 2.22 Ovulation
- 2.23 Egg-laying
- 2.24 Male Mating
- 2.25 Sleep
- 2.26 Pathogen Response
Notes for process pages
- Pathway databases
- BioCyc: Peter Karp, SRI, PathoLogic tools,
- KEGG:
- C. elegans specific db, Armand Leroi's, NMR-based metabolomic data using MetaShark for assigning enzyme classification
- WikiPathways: Alex Pico, Gladstone, GenMAPP Pathway Markup Language (GPML), PathVisio
- Reactome: Peter D'Eustachio, Lisa Matthews
- NEMAPATH: Makedonka Mitreva, nematode.net, nonelegans
- Visualization software
- Cytoscape
- GenMAPP
- PathVisio
Processes in C. elegans
Cell death
|
|
Autophagy
Dauer arrest
|
|
L1 arrest
Embryonic blastomere specification
Gonad development
Germ line development
Male-specific development
|
Vulval development
|
|
|
Cell migration
|
Neuronal regeneration
Neuronal migration
Molting
Cell specification
Axis formation
|
|
Chemosensation
|
|
Mechanosensation
Behavioral plasticity
Locomotion
|
Feeding (Pharyngeal pumping)
Defecation
Ovulation
Egg-laying
Male Mating
|
Sleep
Pathogen Response
|