Process page mock-ups
From WormBaseWiki
Revision as of 14:32, 8 July 2009 by Psternberg (talk | contribs)
Contents
- 1 Notes for process pages
- 2 Processes in C. elegans
- 2.1 Cell death
- 2.2 Autophagy
- 2.3 Dauer arrest
- 2.4 L1 arrest
- 2.5 Vulval development
- 2.6 Cell migration
- 2.7 Neuronal regeneration
- 2.8 Neuronal migration
- 2.9 Molting
- 2.10 Cell specification
- 2.11 Axis formation
- 2.12 Chemosensation
- 2.13 Mechanosensation
- 2.14 Behavioral plasticity
- 2.15 Locomotion
- 2.16 Feeding (Pharyngeal pumping)
- 2.17 Defecation
- 2.18 Ovulation
- 2.19 Egg-laying
- 2.20 Male Mating
- 2.21 Pathogen Response
Notes for process pages
- Pathway databases
- BioCyc: Peter Karp, SRI, PathoLogic tools,
- KEGG:
- C. elegans specific db, Armand Leroi's, NMR-based metabolomic data using MetaShark for assigning enzyme classification
- WikiPathways: Alex Pico, Gladstone, GenMAPP Pathway Markup Language (GPML), PathVisio
- Reactome: Peter D'Eustachio, Lisa Matthews
- NEMAPATH: Makedonka Mitreva, nematode.net, nonelegans
- Visualization software
- Cytoscape
- GenMAPP
- PathVisio
Processes in C. elegans
Cell death
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Autophagy
Dauer arrest
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L1 arrest
Vulval development
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Cell migration
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Neuronal regeneration
Neuronal migration
Molting
Cell specification
Axis formation
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Chemosensation
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Mechanosensation
Behavioral plasticity
Locomotion
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Feeding (Pharyngeal pumping)
Defecation
Ovulation
Egg-laying
Male Mating
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Pathogen Response
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