Process page mock-ups
From WormBaseWiki
Contents
- 1 Notes for process pages
- 2 Processes in C. elegans
- 2.1 Cell Programs
- 2.2 Cell death
- 2.3 Dauer formation/arrest
- 2.4 L1 development
- 2.5 Tissue morphogenesis
- 2.6 Organ development
- 2.7 Germ line development
- 2.8 Spermatogenesis
- 2.9 Oogenesis
- 2.10 Sex determination
- 2.11 Dosage compensation
- 2.12 Male-specific development
- 2.13 Vulval development
- 2.14 Cell migration
- 2.15 Neuronal regeneration
- 2.16 Molting
- 2.17 Cell specification
- 2.18 Axis formation
- 2.19 Chemosensation
- 2.20 Mechanosensation
- 2.21 Synaptic transmission
- 2.22 Behavioral plasticity
- 2.23 Locomotion
- 2.24 Feeding
- 2.25 Defecation
- 2.26 Ovulation
- 2.27 Male Mating
- 2.28 Sleep
- 2.29 Pathogen Response
Notes for process pages
- Pathway databases
- BioCyc: Peter Karp, SRI, PathoLogic tools,
- KEGG:
- C. elegans specific db, Armand Leroi's, NMR-based metabolomic data using MetaShark for assigning enzyme classification
- WikiPathways: Alex Pico, Gladstone, GenMAPP Pathway Markup Language (GPML), PathVisio
- Reactome: Peter D'Eustachio, Lisa Matthews
- NEMAPATH: Makedonka Mitreva, nematode.net, nonelegans
- Visualization software
- Cytoscape
- GenMAPP
- PathVisio
Processes in C. elegans
Cell Programs
- [division]
- [differentiation]
- [death]
- [division in male]
- [differentiation in hermaphrodite]
- [differentiation in male]
- [death in hermaphrodite]
- [division in hermaphrodite]
Cell death
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Dauer formation/arrest
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L1 development
- [L1 arrest]
Tissue morphogenesis
- [Embryonic mesendoderm development]
- [Muscle morphogenesis]
Organ development
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Germ line development
Spermatogenesis
Oogenesis
Sex determination
Dosage compensation
Male-specific development
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Vulval development
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Cell migration
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Neuronal regeneration
Molting
Cell specification
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Axis formation
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Chemosensation
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Mechanosensation
Synaptic transmission
Behavioral plasticity
- [Habituation]
- [Adaptation]
Locomotion
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Feeding
- [Pharyngeal pumping]
- [Foraging]
Defecation
- [Defecation cycle]
Ovulation
- [Egg-laying]
- [Egg-laying cycle]]
Male Mating
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Sleep
Pathogen Response
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