Difference between revisions of "WormBase-Caltech Weekly Calls"
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* Anatomy function project with Raymond | * Anatomy function project with Raymond | ||
* Many types of anatomy function data submitted via AFP | * Many types of anatomy function data submitted via AFP | ||
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+ | == June 10, 2021 == | ||
+ | |||
+ | === Variation-Gene Associations === | ||
+ | *Some QC on AFP-extracted data led to the realization that at least some of the 'tm' variations aren't associated with genes on tazendra | ||
+ | *https://github.com/WormBase/author-first-pass/issues/204 | ||
+ | *https://github.com/WormBase/website/issues/8262 | ||
+ | *It looks like non-manually asserted variation-gene associations will be generated via the VEP pipeline during the build, so Caltech would need to get this information from each WB release |
Revision as of 13:08, 8 June 2021
Contents
Previous Years
2021 Meetings
June 3, 2021
Reserving meeting rooms
- Raymond encountering challenges with setting up regular meeting room reservations in Chen building
- We've been asked to make reservations one week in advance
- Need to use a room if we reserve it
Summer student(s)
- Anatomy function project with Raymond
- Many types of anatomy function data submitted via AFP
June 10, 2021
Variation-Gene Associations
- Some QC on AFP-extracted data led to the realization that at least some of the 'tm' variations aren't associated with genes on tazendra
- https://github.com/WormBase/author-first-pass/issues/204
- https://github.com/WormBase/website/issues/8262
- It looks like non-manually asserted variation-gene associations will be generated via the VEP pipeline during the build, so Caltech would need to get this information from each WB release