Difference between revisions of "WormBase-Caltech Weekly Calls"
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| − | + | RNA-Seq and Tiling Array data | |
| + | *Data in SPELL | ||
| + | *Wen found a lot more non modENCODE data sets | ||
| + | *May use SVM for expression cluster data | ||
| + | *Gene IDs can be found from original paper or data set | ||
| + | *Up-to-date mapping to genes is not currently done | ||
| + | |||
| + | |||
| + | Paper Categorization | ||
| + | *Word frequency | ||
| + | *SVM | ||
| + | ** | ||
Revision as of 16:38, 1 August 2013
2013 Meetings
August 1, 2013
Quarterly Progress Reports
- Capturing curation stats from the Curation Status form
- What data types do we want to capture that we are not currently?
- We have frequent database dumps that can be read for stats
- We can capture the stats table statically on a regular basis (daily?)
RNA-Seq and Tiling Array data
- Data in SPELL
- Wen found a lot more non modENCODE data sets
- May use SVM for expression cluster data
- Gene IDs can be found from original paper or data set
- Up-to-date mapping to genes is not currently done
Paper Categorization
- Word frequency
- SVM
