Difference between revisions of "Main Page"

From WormBaseWiki
Jump to navigationJump to search
 
(49 intermediate revisions by 10 users not shown)
Line 1: Line 1:
−
This is the official wiki site for [http://www.wormbase.org WormBase], the database of the model organism [http://en.wikipedia.org/wiki/Caenorhabditis_elegans Caenorhabditis elegans] and related nematodes. WormBase is developed by an [[WormBase Consortium|international consortium]] of researchers and computer scientists.  
+
This is the official wiki site for [http://www.wormbase.org WormBase], the database of the model organism [http://en.wikipedia.org/wiki/Caenorhabditis_elegans Caenorhabditis elegans] and related nematodes. WormBase is developed by an [http://www.wormbase.org/about/staff#01--10 international consortium] of researchers and computer scientists.  
  
 
To edit this Wiki, please create an account (click on the 'log in/create account' link at the top of the page). Before contributing, please see the [[Wiki objectives and usage guidelines|WormBaseWiki usage guidelines]].  
 
To edit this Wiki, please create an account (click on the 'log in/create account' link at the top of the page). Before contributing, please see the [[Wiki objectives and usage guidelines|WormBaseWiki usage guidelines]].  
  
 +
== WormBoard  ==
 +
Since its inception the ''C. elegans'' field has relied on the voluntary efforts of community-minded individuals to develop and organize key resources and meetings. As the field enters its second half-century, continued growth necessitates a more formal structure for such efforts. The Worm Board has been formed to advocate for ''C. elegans'' research internationally and to foster the continued development of community resources.
 +
 +
*[[WormBoard|The WormBoard Home Page]]
 +
**[[WormBoard#WormBoard_Charter|Charter]] -- ''Charter and mission of the WormBoard''
 +
**[[WormBoard#WormBoard_Members|Members]] -- ''Current and former members''
 +
 +
===WormBoard Reports===
 +
*November 2020 -- ''[https://wiki.wormbase.org/images/Elections_Subcommittee_Proposal_toWBvote.docx Election Subcommittee Report (docx)]''
 +
*[[WormBoard_Report:_August_2020|August 2020]]
 +
*[https://blog.wormbase.org/2020/07/18/promoting-equity-in-the-c-elegans-community July 2020]
 +
 +
=== Initiatives ===
 +
*[[C._elegans_Community_Mentor_Match_Program|C. elegans Community Mentor Match Program]]
  
 
== Using WormBase  ==
 
== Using WormBase  ==
  
 
*[[Site Map|Site Map]]  
 
*[[Site Map|Site Map]]  
−
*[[Mirror sites and frozen releases|Mirror sites and frozen releases]]
 
  
−
User Guides  
+
=== User Guides ===
−
 
+
*[http://www.wormbase.org/about/Frequently_asked_questions FAQ]
−
*[[User Guide|Official User Guide]]  -- ''Usage, FAQs, Glossary of terms''
 
 
*[[Data mining|Data mining]] - ''Learn about the methods for mining WormBase systematically''  
 
*[[Data mining|Data mining]] - ''Learn about the methods for mining WormBase systematically''  
 
*[[Searching WormBase for Information About C. elegans (Wiley)|Searching WormBase for Information About C. elegans (Wiley)]]  
 
*[[Searching WormBase for Information About C. elegans (Wiley)|Searching WormBase for Information About C. elegans (Wiley)]]  
−
*[[Downloads|Downloads]] - ''Download commonly requested files and datasets''  
+
*[[WormBase_Search_Syntax_Guide|Search Syntax]]
−
*[[Guidelines for Users on Submitting/Reporting Data to WormBase|Submitting data and reporting errors]]
+
*[[Downloads|Downloads]] - ''Download commonly requested files and datasets''
 +
*[[Guidelines for Users on Submitting/Reporting Data to WormBase|'''Submitting Data''']]
  
−
General Information  
+
=== General Information ===
  
 
*[[Local installation of WormBase|Installing WormBase on your own computer]]  
 
*[[Local installation of WormBase|Installing WormBase on your own computer]]  
 
*[[Editorial policy|Editorial policy]] - ''WormBase editorial policy''
 
*[[Editorial policy|Editorial policy]] - ''WormBase editorial policy''
  
−
== Using WormMine  ==
+
=== WormMine  ===
−
[http://206.108.125.166:8080/wormmine Our WormMine instance]
+
[http://www.wormbase.org/tools/wormmine/begin.do Our WormMine instance]
−
This is on our development machine, so this may go down sporadically while developing.
 
  
−
[[WormMine|Wiki Page]]
+
* [[WormMine|Wiki Page]]
 +
* [[UserGuide:WormMine|User Guide]]
  
 
== Community Resources  ==
 
== Community Resources  ==
Line 62: Line 75:
 
[http://www.wormbase.org WormBase] offers a number of ways to stay up-to-date with new features and datasets, to make feature requests, and to ask for assistance with the database.  
 
[http://www.wormbase.org WormBase] offers a number of ways to stay up-to-date with new features and datasets, to make feature requests, and to ask for assistance with the database.  
  
−
* Live Help Desk: [http://friendfeed.com/rooms/wormbase The WormBase Room on FriendFeed]
 
 
* Twitter: [http://www.twitter.com/wormbase Status updates], [http://www.twitter.com/wormbase_commit Software commit messages]  
 
* Twitter: [http://www.twitter.com/wormbase Status updates], [http://www.twitter.com/wormbase_commit Software commit messages]  
 
* Mailing Lists: [[Mailing lists#help|General questions]] | [[Mailing lists#developers|Developers]] -- [[Mailing lists|More...]]  
 
* Mailing Lists: [[Mailing lists#help|General questions]] | [[Mailing lists#developers|Developers]] -- [[Mailing lists|More...]]  
Line 68: Line 80:
 
*[[WormBase Newsletters|WormBase Newsletters]]  
 
*[[WormBase Newsletters|WormBase Newsletters]]  
 
*[http://www.wormbook.org/announce.html WormBook Announcements] - ''low volume''
 
*[http://www.wormbook.org/announce.html WormBook Announcements] - ''low volume''
−
*[[Help Desk During International Worm Meeting]]
 
−
 
  
 
== Internal Documentation ==  
 
== Internal Documentation ==  
Line 75: Line 85:
 
*[[WormBase Staff Resources]] -- ''A guide to the tools available for WormBase staff''
 
*[[WormBase Staff Resources]] -- ''A guide to the tools available for WormBase staff''
  
−
*[[Developer documentation|Developer documentation]]
+
*[[:Category:Web_Dev|Developer documentation]]
  
 
*[[Caltech documentation]]
 
*[[Caltech documentation]]
 +
 +
*[[:Category:Hinxton|Hinxton documentation]]
  
 
*[[Working Groups|Working Groups]]
 
*[[Working Groups|Working Groups]]
Line 84: Line 96:
  
 
*[[WormBase SAB Meeting|WormBase SAB Meeting]]
 
*[[WormBase SAB Meeting|WormBase SAB Meeting]]
−
 
−
*[[Co-op Documentation]]
 
−
 
−
*[[Development workflow - webdev]]
 
−
 
−
*[[WormMine development status]]
 
  
  

Latest revision as of 18:19, 5 November 2024

This is the official wiki site for WormBase, the database of the model organism Caenorhabditis elegans and related nematodes. WormBase is developed by an international consortium of researchers and computer scientists.

To edit this Wiki, please create an account (click on the 'log in/create account' link at the top of the page). Before contributing, please see the WormBaseWiki usage guidelines.

WormBoard

Since its inception the C. elegans field has relied on the voluntary efforts of community-minded individuals to develop and organize key resources and meetings. As the field enters its second half-century, continued growth necessitates a more formal structure for such efforts. The Worm Board has been formed to advocate for C. elegans research internationally and to foster the continued development of community resources.

WormBoard Reports

Initiatives

Using WormBase

User Guides

General Information

WormMine

Our WormMine instance

Community Resources


Reagents and Protocols

Web Resources


Staying up-to-date

WormBase offers a number of ways to stay up-to-date with new features and datasets, to make feature requests, and to ask for assistance with the database.

Internal Documentation

Retrieved from "https://wiki.wormbase.org/index.php?title=Main_Page&oldid=38557"