Difference between revisions of "WormBase-Caltech Weekly Calls"

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*Raymond & Juancarlos working on incorporation of AMIGO2 into WormBase
 
*Raymond & Juancarlos working on incorporation of AMIGO2 into WormBase
 
*Eventually we will embed AMIGO2 features into WormBase pages
 
*Eventually we will embed AMIGO2 features into WormBase pages
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= May 16, 2013 =

Revision as of 15:31, 16 May 2013

2009 Meetings

2011 Meetings

2012 Meetings


2013 Meetings


January

February

March

April


May 2, 2013

Intermine

  • Google Doc for collecting questions, comments and data here
  • Example queries/questions
    • How to get GO terms for a list of genes?
    • Check FlyMine as a positive control (for functionality and templates)


International Worm Meeting

  • Souvenirs: espresso cups!
  • Posters
    • We will generate templates for posters and send around
    • We can't/won't get the extra space we hoped to get, as of right now
    • Will have to put posters in their designated locations, unless something changes


Computers

  • Do we need new computers? Could order by June
  • Spica getting old
  • Elbrus? Tenaya?
  • New server?
  • Postgres backup? Currently on external hard drives. Amazon backup? Network hard drives?
  • On tazendra, users can store files on /home2
  • Mac users have local backup (Time Machine); critical content should be backed up elsewhere also, perhaps


May 9, 2013

Handling Dead Genes

  • Dumping process changes outlined here
  • Will get sorted out before the WS239 upload
  • Chris will begin with Juancarlos


IWM Preparations

  • Workshops
    • WormMine
      • Needs testing
      • Regular conference call 9:30am PDT every Thursday (when no 8:30 international conference call)
      • Also conference call after every international conference call
        • Documentation
          • JD started a Wiki Page for documentation
          • Testing documentation on Wiki here
  • Posters
    • Need a template
    • Text and figures can be assembled in meantime
  • Souvernirs
    • Espresso cups
    • Need a logo: worm shape with "WormBase" above/below it


WormBase Outreach YouTube Channel

  • Mac users can upload directly from Quicktime
  • Can capture tutorials in response to user requests as well as for upcoming IWM Workshops
  • YouTube account name: outreach@wormbase.org


Next citace upload

  • By 10am on Friday June 21st, 2013


AMIGO2

  • Slowly progressing at core development side
  • Raymond & Juancarlos working on incorporation of AMIGO2 into WormBase
  • Eventually we will embed AMIGO2 features into WormBase pages


May 16, 2013