WormBase Model:Rearrangement
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Model
//////////////////////////////////////////////////////////////////////////////// // // ?Rearrangement class // //////////////////////////////////////////////////////////////////////////////// ?Rearrangement Evidence #Evidence Name Other_name ?Text Variation ?Variation XREF Rearrangement Type Deletion Duplication Free_dup Translocation Compound Text Phenotype ?Phenotype XREF Rearrangement #Phenotype_info Phenotype_not_observed ?Phenotype XREF Not_in_Rearrangement #Phenotype_info //added by Wen to separate Not phenotype from real phenotypes Balances ?Map #Balancer Marked By_variation ?Variation XREF Marked_rearrangement By_transgene ?Transgene XREF Marked_rearrangement By_other ?Text // possibility to refer to other Intervals to describe a complex rearrangement // for the worm this is not too necessary, but important for fly and mouse // or perhaps there should be another class Complex_Rear that refers to // several intervals. Reference_strain ?Strain Species UNIQUE ?Species Remark ?Text #Evidence Isolation Author ?Author // use Person where possible, else use Author Person ?Person Date DateType Mutagen UNIQUE Text UNIQUE Text // Text is dose Source_rearrangement ?Rearrangement XREF Derived_rearrangement Derived_rearrangement ?Rearrangement XREF Source_rearrangement Map ?Map XREF Rearrangement #Map_position Positive Gene_inside ?Gene XREF Inside_rearr #Evidence Locus_inside ?Locus XREF Inside_rearr ?Author Clone_inside ?Clone XREF Inside_rearr ?Author Rearr_inside ?Rearrangement Negative Gene_outside ?Gene XREF Outside_rearr #Evidence Locus_outside ?Locus XREF Outside_rearr ?Author Clone_outside ?Clone XREF Outside_rearr ?Author Rearr_outside ?Rearrangement Mapping_data Pos_neg_data ?Pos_neg_data 2_point ?2_point_data Multi_point ?Multi_pt_data Display Hide_under UNIQUE ?Rearrangement XREF Hides Hides ?Rearrangement // no XREF on purpose Location ?Laboratory #Lab_Location URL Text Strain ?Strain XREF Rearrangement Reference ?Paper XREF Rearrangement
Proposed Changes
Unused tags
Phenotype
By_other
Species
URL