Difference between revisions of "Species available through WormBase (overview)"
From WormBaseWiki
Jump to navigationJump to searchLine 56: | Line 56: | ||
|- | |- | ||
|[[Caenorhabditis remanei|''Caenorhabditis remanei'']] | |[[Caenorhabditis remanei|''Caenorhabditis remanei'']] | ||
− | | [http://dev.wormbase.org/db/gb2/gbrowse/c_remanei]<br> - includes nGASP predictions | + | | [http://dev.wormbase.org/db/gb2/gbrowse/c_remanei yes]<br> - includes nGASP predictions |
| genomic, proteins | | genomic, proteins | ||
| | | |
Revision as of 12:52, 5 January 2010
Species | Genome Browser |
BLAST | BLAT | Genes | Sequences | Proteins | Orthology |
Brugia malayi | yes -missing name data for gene models -gene page available for brigpep, remaneiX, and wormpep protein match features |
BLAST Search genomic, proteins |
|||||
Caenorhabditis elegans | yes | BLAST Search genes, proteins, ests, genomic |
BLAT Search | Gene Summary | Sequence Summary | Protein Summary | |
Caenorhabditis brenneri | genomic, proteins | ||||||
Caenorhabditis briggsae | Yes - includes nGASP predictions | genes, proteins, ests, genomic | genomic | ||||
Caenorhabditis japonica | yes - includes nGASP predictions - bug: when click 'update image' all toggle buttons disappear, this happens with other species too |
genomic | Gene Summary | Sequence Summary | Protein Summary | ||
Caenorhabditis remanei | yes - includes nGASP predictions |
genomic, proteins | Gene Summary | Sequence Summary -error probably with inline image issue, shows up right in dev |
Protein Summary | ||
Haemonchus contortus | |||||||
Meloidogyne hapla | genomic | ||||||
Meloidogyne incognita | |||||||
Pristionchus pacificus | genomic, proteins | ||||||