Difference between revisions of "Species available through WormBase (overview)"
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|[[Caenorhabditis remanei|''Caenorhabditis remanei'']] | |[[Caenorhabditis remanei|''Caenorhabditis remanei'']] | ||
− | | | + | | [http://www.wormbase.org/db/seq/gbrowse/c_remanei]<br> - includes nGASP predictions |
| genomic | | genomic | ||
| proteins | | proteins | ||
− | | | + | | [http://www.wormbase.org/db/gene/gene?name=WBGene00063512 Gene Summary] |
− | | | + | | [http://www.wormbase.org/db/seq/sequence?name=CRE02979;class=Gene_name Sequence Summary] <br> -error probably with inline image |
− | | | + | | [http://www.wormbase.org/db/seq/protein?name=CRE02979;class=CDS Protein Summary] |
| | | | ||
|- | |- |
Revision as of 12:09, 5 January 2010
Species | Genome Browser |
BLAST | BLAT | Genes | Sequences | Proteins | Orthology |
Brugia malayi | yes -missing name data for gene models -gene page available for brigpep, remaneiX, and wormpep protein match features |
BLAST Search genomic, proteins |
|||||
Caenorhabditis elegans | yes | BLAST Search genes, proteins, ests, genomic |
BLAT Search | Gene Summary | Sequence Summary | Protein Summary | |
Caenorhabditis brenneri | |||||||
Caenorhabditis briggsae | Yes - includes nGASP predictions | genes, proteins, ests, genomic | genomic | ||||
Caenorhabditis japonica | yes - includes nGASP predictions - bug: when click 'update image' all toggle buttons disappear, this happens with other species too |
genomic | Gene Summary | Sequence Summary | Protein Summary | ||
Caenorhabditis remanei | [1] - includes nGASP predictions |
genomic | proteins | Gene Summary | Sequence Summary -error probably with inline image |
Protein Summary | |
Haemonchus contortus | |||||||
Meloidogyne hapla | |||||||
Meloidogyne incognita | |||||||
Pristionchus pacificus | |||||||