Difference between revisions of "Physical Interactions"
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+ | =Project Requirements= | ||
+ | |||
+ | ==Model Development== | ||
+ | |||
ACeDB data models [http://wiki.wormbase.org/index.php/Gene_Interaction#Interaction_Models] | ACeDB data models [http://wiki.wormbase.org/index.php/Gene_Interaction#Interaction_Models] | ||
+ | |||
+ | ==Data Conversion== | ||
+ | |||
+ | [[Existing WormBase Y2H and Y1H data to New Model]] | ||
+ | |||
+ | [[BioGRID ftp file to WormBase Model]] | ||
+ | |||
+ | ==Data Storage== | ||
+ | |||
+ | [[New postgres tables]] | ||
+ | |||
+ | ==Dumping .ace file== | ||
+ | |||
+ | ==Converting GO Data for other Physical Interactions== | ||
+ | |||
+ | [[Protein-Nucleic Acid Interactions]] | ||
+ | |||
+ | [[Protein-Other Entity Interactions (lipids, metal ions, other chemicals) - should this be included?]] | ||
+ | |||
+ | [[Implications for Populating Column 16]] |
Latest revision as of 20:41, 13 June 2011
Contents
Project Requirements
Model Development
ACeDB data models [1]
Data Conversion
Existing WormBase Y2H and Y1H data to New Model
BioGRID ftp file to WormBase Model
Data Storage
Dumping .ace file
Converting GO Data for other Physical Interactions
Protein-Nucleic Acid Interactions
Protein-Other Entity Interactions (lipids, metal ions, other chemicals) - should this be included?