BioGRID ftp file to WormBase Model

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Chris Stark made a file available with BioGRID worm curation that has the following columns:

Systematic A (e.g. AC7.2)

Systematic B

BioGRID ID A

BioGRID ID B

Wormbase ID A (e.g. WBGene00004929)

Wormbase ID B

Experimental System

Experimental System Type (physical or genetic)

Author

Pubmed

Organism Interactor A

Organism Interactor B

Quantitative Score (hyphen if no score)

Modification

Throughput (high throughput or low throughput)

Qualification (pipe-delimited)

Phenotype (pipe-delimited phenotype:phenotype type)


The Biogrid IDs are included in case WB wants to make links back to Biogrid using the format: http://thebiogrid.org/42412

This file will be posted at the following url on a monthly basis: http://www.thebiogrid.org/downloads/datasets/WORMBASE.tab.txt

Back to Physical Interactions