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(10 papers)
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100209 seqchange
112009
112009 geneprod GO
112009 seqchange
2002 - East Coast Worm Meeting
2002 - Midwest Worm Meeting
2002 - The 3rd Japanese C. elegans Meeting
2002 - West Coast Worm Meeting
2003 - 14th International Worm Meeting
2004 - East Asia C. elegans Meeting
2004 - East Coast Worm Meeting
2004 - European Worm Meeting
2004 - Midwest Worm Meeting
2004 - West Coast Worm Meeting
2005 - 15th International Worm Meeting
2006 - Development and Evolution
2006 - EMBO Caenorhabditis Evolution Workshop
2006 - European Worm Meeting
2006 - GSA Model Organisms Meeting
2006 - Neuronal Development, Synaptic Function, and Behavior
2008-SAB-Meeting Scientific
2008-SAB Meeting
2008.01-Toronto
2010.05 OICR WebDev Meeting
2010 - Paper Pipeline: Documentation and Instructions
3rd International BioCurator Meeting, April 16th - 19th, 2009, Berlin, Germany
=Automation progress=
ALTERNATE PROTOCOL 1: INSTALLING AND RUNNING WormBase LOCALLY
About elegans
About the WormBase data model
Abstracts
Acceptable use policy
Acceptance to first-pass
AceDB class-Interaction
AceDB class-Y2H
AceDB classes
AceDB classes tutorial
AceOjbect Redesign Page
Adding Missing Authors
Adding Papers not in PubMed
Adding pmid Identifier to Paper Object
Administration:Installing WormBase
Administration:WormBase Development Environment
Administration:WormBase Production Environment
All genes
Allele curation
Antibody
Antibody curation
Application overview
Ascaris suum
Associating genes with papers
Attaching Genes to Papers
Author Curation
Author Person
Author first pass requests
Automating dicty literature upload - Arun, Petra, Sidd
Automation progress
BASIC PROTOCOL 10: MINING GENE DATA WITH WORMMART
BASIC PROTOCOL 11: DOWNLOADING A BATCH OF SEQUENCES
BASIC PROTOCOL 12: EXAMINING THE GENOMIC CONTENT OF A CLASSICAL GENETIC INTERVAL
BASIC PROTOCOL 1: NAVIGATING THE WormBase HOME PAGE
BASIC PROTOCOL 2: PERFORMING A DATABASE SEARCH
BASIC PROTOCOL 3: EXAMINING A GENE IN C. ELEGANS
BASIC PROTOCOL 4: EXAMINING A MOLECULAR SEQUENCE IN C. ELEGANS
BASIC PROTOCOL 5: FINDING PROTEIN FEATURES
BASIC PROTOCOL 6: SEARCHING FOR GENE PRODUCTS WITH PARTICULAR SEQUENCE MOTIFS
BASIC PROTOCOL 7: USING THE GENOME BROWSER
BASIC PROTOCOL 8: VIEWING THE C. BRIGGSAE GENOME AND ITS SYNTENY WITH C. ELEGANS
BASIC PROTOCOL 9: FINDING SEQUENCE SIMILARITIES WITH BLAST
BLAST/BLAT Page
Balancers
Balloon Tooltips
Base node configuration - CentOS5
BioGRID ftp file to WormBase Model
Books
Browser Support Statement
Brugia malayi
Brute force - modencode migration
Building Frozen Releases
Building Squid
Building WormMart
Bursaphelenchus xylophilus
C.remanei
COMMENTARY
CSHL documentation
CVS Access To WormBase
Caenorhabditis angaria
Caenorhabditis brenneri
Caenorhabditis briggsae
Caenorhabditis drosophilae
Caenorhabditis elegans
Caenorhabditis japonica
Caenorhabditis remanei
Caenorhabditis species 11
Caenorhabditis species 3 strain PS1010
Caenorhabditis species 5
Caenorhabditis species 7
Caenorhabditis species 9
Caltech documentation
Cell death
Cell division
Citace data assignments
Citing WormBase
Citing and Acknowledging WormBase
Co-op Documentation
Coding standards
ComparaTutorial
Concise Descriptions
Conference call agendas and minutes
Conference calls
Configuring a server to host virtual machines
Converting Coordinates between releases
Converting GFF2 to GFF3
Cosmids/YACs
Creating New Book Objects
Creating Virtual Disks
Creating a Google Sitemap
Crem Contig1442 Crem Contig1336 Poss Join
Cronjobs
Curate with Phenote
Curated data types
Curation status
DNA Degradation Pathway
Data mining
Data mining:AQL tutorial
Data mining:WQL tutorial
Data mining:WormMart
Data mining:WormMart:Example 1
Data mining:WormMart:Example 1 new
Data mining:WormMart:Example 2
Data mining:WormMart:Example 3
Data mining:WormMart:Example 5
Data mining:WormMart:Example 6
Data types collected on first-pass forms
Data types used on first-pass forms
Datatypes flagged
Death
December 15, 2010
Deleting Authors
Design Specs: API
Design Specs: Application Configuration
Design Specs: Application Request Flow
Design Specs: Authorization and Authentication
Design Specs: CSS
Design Specs: Configuration setup and 3rd party software install
Design Specs: Database Connectivity
Design Specs: Evidence Handling
Design Specs: GBrowse Integration
Design Specs: Interactivity
Design Specs: Production management
Design Specs: REST web service
Design Specs: Scalability
Design Specs: Session Cleanup
Design Specs: Templates
Developer documentation
Developer notes
Development notes WS163
Development notes WS164
Development notes WS165
Development notes WS166
Development notes WS167
Development notes WS170
Development notes WS171
Development notes WS173
DictyBase
Discussion
Disease and Drugs
Doodle Polls for conference call scheduling
Downloads
Dumping Script
Editorial policy
Entering New Paper Objects
Entering WBG Articles
Entity classes and problems
Erratum in and Erratum for
Establishing the SVN repository
Example Pages
Example process pages
Experimental protocols
Expression Pattern
FAQs
FIGURE(S)
FP curator comments for St.Louis and Sanger structure correction data type
Feature Requests
Feature WishList
February 15, 2011
February 22, 2011
First-pass data types explained
First-pass flagging pipelines
First-pass schedule, instructions, automation
First-pass to Curation
FlyBase
Foreign Characters in Author Names from PubMed
Formal development strategy
Formatting Help
Former How To Build A WormBase Mirror
Fosmids
Further clarification
Future Entities for markup
GBrowseInstallation
GBrowse Administration
GFF2 features
GFF3 Validation
GFF3 features (C. briggsae)
GFF3 features (C. elegans)
GFF3specProposal
GFF source methods
GO entity markup
GSA-GO Linking Summary Tables
GSA Markup Meeting Notes
GSA Markup SOP
GSA linking pipeline
Gazette articles
Gene-Paper Associations
Gene-Paper Connections
Gene Class Descriptions
Gene Interaction
Gene Ontology
Gene Page
Gene Prediction
Gene Regulation
Gene finders
General User Guide
General User Guide Temp
General administration
General specifications
Generation of VPC's
Genes
Genes mentioned along with word in Figure or Table category
Genetics Author pass form
Genetics Markup by Textpresso
Genetics Markup by Textpresso and First Pass
Genetics Paper Pipeline
Genome Browser Help
Genome Standards
Genome sequence changes
Geographic Displays
Getting Meeting Abstracts into WormBase
Getting Papers into WormBase
Ggi OA
Globodera pallida
Glossary of terms
Guidelines for Users on Submitting/Reporting Data to WormBase
HOWTO migrate a CGI
Haemonchus contortus
Handling Corrections and Errata
Help Desk During International Worm Meeting
Help desk schedule
Heterorhabditis bacteriophora
Horrible curation examples
How To Build A WormBase Mirror
How are the repeats determined?
How to FirstPass
How to build a WormBase Virtual Machine
How to build a frozen release
How to make a new Textpresso category
INTERNET RESOURCES
INTRODUCTION
Importing PFAM Images
Importing Protein Structure Data
Importing Protein Structure Data Images
In book
In vitro flagging
Installing Catalyst
Installing Phenote
Installing Phenote+
Instructions for Genetics
Instructions for curators
Interaction Display in the Gene Page
International C. elegans Meetings - UCLA
Introduction to Phenote+
Invalid PMIDs in postgres and WormBase
January 12, 2010
Javascript libraries
Jfp postgres table details
Job Openings
Journal first-pass (jfp) postgres table details
Journals
Juancarlos
KEY REFERENCES
Key publications
Lexicon Development Tool
Life Stage
Linking To WormBase
Linking script pipeline
Local installation of WormBase
Log file management and analysis
Lung Development Targets (November 2009 - February 2010)
MacOSX(Leopard)
Mac OSX(Leopard)
Mailing lists
Main Page
Main Page Temp
Managing Perl Libraries
Managing Perl libraries across nodes
Managing servers hosting virtual machines
Mapped Transgenes
Mark Up Work Flow
Mark up policy
Markup excerpts
Meeting Abstracts
Meeting abstracts
Meetings
Meloidogyne hapla
Meloidogyne incognita
Merging Papers
Merging Papers - Top Secret from the Bush administration torture memos
Mf hmm tool
Microarray Data
Migrating frozen releases to OICR
Migration
Milestones and progress
Mining AceDB/WormBase with AcePerl
Mining WormBase with Bio::DB::GFF
Mirror sites and frozen releases
Missing Abstracts in PLoS One, PLoS Biol Papers
Missing PMIDs
ModENCODE
ModENCODE Analysis & metadata discussion
ModENCODE Integration status
ModENCODE TilingArray
Molecule
Molecule model build
Molecule papers
Monitoring services and servers
Most wanted web features
MySQL database replication
N-Browse Installation & Interaction Data
N-Z titles
NBC sign off documentation
NGASP
NGASP Results
NGASP submit
Nematode resequencing and diversity
Nematode sequencing summary
New Paper Model - Model and Changes to Pipeline
Nippostrongylus brasiliensis
Nomenclature
November 25, 2009 - Sequence Curation Flags
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