Difference between revisions of "WormBase Genomes"

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== WormBase Genomes ==
 
== WormBase Genomes ==
  
This is a record of the current and proposed set of genomes in WormBase.
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An up to date list of genomes in WormBase can be found at: http://www.wormbase.org/species/all
  
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== See also ==
  
{| class="wikitable" border="1"
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*[[Caenorhabditis elegans|''Caenorhabditis elegans'']]
|-
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**[http://en.wikipedia.org/wiki/Caenorhabditis_elegans Wikipedia entry on ''C. elegans'']
!  Species
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** [[About elegans|''About C. elegans'']]
!  NCBI TaxonID
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**[[Key publications|Key publications]]
!  Tier
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**[[Nomenclature|Genetic Nomenclature]]
!  Genome
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**[[Other nematodes|Other nematodes]]
!  Genes
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**[[Nematode sequencing summary|Nematode resequencing and diversity]]
!  Origin
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**[[Partslist|The C. elegans Parts List (List of Cells)]]
!  Comments
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*[[Possible_assembly_errors]] - in all Caenorhabditis species
|-
 
| Caenorhabditis briggsae
 
| 6228
 
| II
 
| Yes
 
| Yes
 
| WashU
 
| New assembly from Erich Haag Sept 2010
 
|-
 
| Caenorhabditis remanei
 
| 31234
 
| II
 
| Yes
 
| Yes
 
| WashU
 
|
 
|}
 
  
=== Phylogeny ===
 
  
Given my understanding of the current phylogenetic literature, the correct guide tree would be:
 
  
    ((((((((C._briggsae,C._remanei),C._brenneri),C._elegans),C._japonica),H._contortus),P._pacificus),(M._hapla,M._incognita)),,B._malayi)
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[[Category:User Guide]]

Latest revision as of 15:07, 14 January 2016