Difference between revisions of "WebDev 2009.12.16-Agenda and Minutes"
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image map working examples: | image map working examples: | ||
http://dev.wormbase.org:9004/db/gene/gene?name=WBGene00006763;class=Gene | http://dev.wormbase.org:9004/db/gene/gene?name=WBGene00006763;class=Gene | ||
| + | |||
| + | *http://dev.wormbase.org:9004/db/gene/variation?name=e1196;class=Variation | ||
| + | |||
| + | * Progress made, things look nicer: 1.9971 | ||
| + | * AC working on: track standardization; upload and share tracks; details and analysis issues | ||
| + | * Names from data source | ||
| + | * Links for summa pages | ||
| + | |||
| + | modENCODE data | ||
| + | * bringing it in | ||
| + | |||
| + | XS: | ||
| + | * inline images working | ||
| + | * to commit development updates | ||
| + | |||
| + | TH: | ||
| + | * production testing for GB2 items | ||
== 5. Tier II/III matrix (all; 10 minutes) == | == 5. Tier II/III matrix (all; 10 minutes) == | ||
* [[Species_available_through_WormBase_%28overview%29|Tier II/Tier III matrix]] | * [[Species_available_through_WormBase_%28overview%29|Tier II/Tier III matrix]] | ||
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| + | Matrix populating assignments: | ||
| + | |||
| + | Find gaps in the information vis-a-vis CE | ||
Norie: | Norie: | ||
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* M. incognita | * M. incognita | ||
* P. pacificus | * P. pacificus | ||
| + | |||
| + | |||
| + | Physical map | ||
| + | |||
| + | * might retire this | ||
| + | * TH to look in more details | ||
| + | * working in GB1 (AC) | ||
== 6. Open Table == | == 6. Open Table == | ||
Latest revision as of 17:48, 16 December 2009
Contents
Agenda
1. Minutes from 2009.12.09
- Goals for SAB -- GB2; tier2/3 support; new system demo
2. Administrative Update (Todd; 10 minutes)
- WS209 deadline
- Send summary of changes made via email
- Server issues - variation summa on production -- upgraded MySQL to 5.1
3. WS209 build status (Norie; 10 minutes)
- Clustal: stick with current version in production
- WS209 still has markup; WS210 will not.
- Updated disease search
- NdlC will check if it is ready to go live with WS209
- BLAST and GFF compile
4. Discuss GB2 issues and status (all; 10 minutes)
image map working examples: http://dev.wormbase.org:9004/db/gene/gene?name=WBGene00006763;class=Gene
- Progress made, things look nicer: 1.9971
- AC working on: track standardization; upload and share tracks; details and analysis issues
- Names from data source
- Links for summa pages
modENCODE data
- bringing it in
XS:
- inline images working
- to commit development updates
TH:
- production testing for GB2 items
5. Tier II/III matrix (all; 10 minutes)
Matrix populating assignments:
Find gaps in the information vis-a-vis CE
Norie:
- B. malayi
- C. brenneri
- C. briggsae
Xiaoqi:
- C. japonica
- C. remanei
- H. contortus
Todd:
- M. hapla
- M. incognita
- P. pacificus
Physical map
- might retire this
- TH to look in more details
- working in GB1 (AC)
