WebDev 2009.08.12-Agenda and Minutes

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Agenda

Minutes from 2009.08.05

Administrative Update (Todd; 10 minutes)

Minutes reviewed

Update: update to production nodes to WS204 smooth modification to address challenges with CentOS - using NFS, distributed logging review CSHL current hardware with PV and planning maintenance -- most will be allowed to "die out"

Describe WS205 development status (Norie; 5 minutes)

  • Icognita
    • Blast/BLAT built (working on interface)
    • Building the GBrowse database for incognita

Development checklist (Norie)

http://www.wormbase.org/wiki/index.php/Release_Schedule#Post_Compile_Check_Matrix

TH: Maybe turn it into a template? Or at least its own page then copy and paste for each release.

Define WS205 development goals (All; 10 munutes)

modENCODE status update (Marc, Zheng; 10 minutes)

Mark: 8-9 data track coming for Loeb data Wiggle files for some data discussed (chip-chip?) Script created sometime ago to turn data to binary format (by LS?) Ant and TH working to strategy to move data to WormBase For trial, Most mature dataset? -> from 2007 Nature paper, dosage compensation data TH: recommend trial with above data to solidify workflow... Mark to email number details to TH

Define WormMart go-live date (Zheng and Todd; 10 minutes)

Open Table