Difference between revisions of "WBConfCall 2023.05.04-Agenda and Minutes"
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** Likely house keeping genes | ** Likely house keeping genes | ||
** Makers used for cell cluster ID | ** Makers used for cell cluster ID | ||
| + | *** integrate into anatomy pages | ||
** Ligand-receptor expression informed cell-cell interaction | ** Ligand-receptor expression informed cell-cell interaction | ||
| + | *** for this and the following items Hinton does not have enough manpower to deal with it | ||
** Transcription factor code per cell type | ** Transcription factor code per cell type | ||
** cis-acting sites for cell types | ** cis-acting sites for cell types | ||
Revision as of 15:48, 4 May 2023
Contents
Agenda and Minutes
HelpDesk
scRNA from Whole-body gene expression atlas of an adult metazoan
- Web site https://wormseq.org/
- Curatable data (need to decide what to take on)
- Interactive graph TPM / % cell expressing per gene (planned)
- Enriched gene set per cell (planned)
- Link out to their web site and analysis tools (planned)
- Inclusion on http://single-cell.wormbase.org/
- if we have the files in .h5ad format we can try to set it up
- Likely house keeping genes
- Makers used for cell cluster ID
- integrate into anatomy pages
- Ligand-receptor expression informed cell-cell interaction
- for this and the following items Hinton does not have enough manpower to deal with it
- Transcription factor code per cell type
- cis-acting sites for cell types
IWM
- Booth
- received this morning an email from the contractor for booth logistics
- carpeting
- electrical and extension cords
- furniture
- received this morning an email from the contractor for booth logistics
- Swag
- General WB swag
- Community curation swag
- microPublication swag
