Difference between revisions of "WBConfCall 2023.05.04-Agenda and Minutes"

From WormBaseWiki
Jump to navigationJump to search
Line 13: Line 13:
 
** Transcription factor code per cell type
 
** Transcription factor code per cell type
 
** cis-acting sites for cell types
 
** cis-acting sites for cell types
 +
 +
== IWM ==
 +
* Anything to discuss?
 +
* Plans for WB swag?

Revision as of 20:18, 3 May 2023

Agenda and Minutes

scRNA from Whole-body gene expression atlas of an adult metazoan

  • Web site https://wormseq.org/
  • Curatable data (need to decide what to take on)
    • Interactive graph TPM / % cell expressing per gene (planned)
    • Enriched gene set per cell (planned)
    • Link out to their web site and analysis tools (planned)
    • Inclusion on http://single-cell.wormbase.org/
    • Likely house keeping genes
    • Makers used for cell cluster ID
    • Ligand-receptor expression informed cell-cell interaction
    • Transcription factor code per cell type
    • cis-acting sites for cell types

IWM

  • Anything to discuss?
  • Plans for WB swag?