Difference between revisions of "WBConfCall 2018.04.19-Agenda and Minutes"
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==Minutes== | ==Minutes== | ||
+ | 1. Biological Ontologies Meeting (ICBO) at Oregon in August | ||
+ | * Raymond, Gary, Chris interested in going (to join phenotype ontology developers meeting at beginning) | ||
+ | * Would contribute to phenotype ontology workshop | ||
+ | |||
+ | 2. WS266 upload | ||
+ | * Files are due May 15th to citace | ||
+ | *Tomorrow is the last day to propose changes to models | ||
+ | *Models will be released next week | ||
+ | |||
+ | 3. Importing Ontologies into WormBase | ||
+ | *Will hold off till WS267 to import RO and ECO | ||
+ | *Will give us more time to think about all the models that may need changing | ||
+ | *Currently some curators using GO codes, GO codes could be automatically mapped to ECO codes | ||
+ | |||
+ | 4. Project meeting and SAB 2018 | ||
+ | *Thursday all day: project meeting, site presentations | ||
+ | *Thursday night dinner | ||
+ | *Friday morning-presentations Afternoon-SAB feedback | ||
+ | *Friday night dinner | ||
+ | |||
+ | Topics for discussion: | ||
+ | *Path to transition to Alliance and potential problems | ||
+ | *Focus on plans and priorities--curation priorities | ||
+ | |||
+ | Travel arrangements: | ||
+ | *Sibyl will send the accomodation code | ||
+ | *Caltech people: contact Sarah for travel arrangements | ||
+ | |||
+ | 5. Genotype class | ||
+ | *Many MODs curate to the Genotype | ||
+ | *There is a practical use of introducing the Genotype class--sometimes authors do not give the names of strains, can represent the entire genetic entity that is the model for disease and/or exhibits the phenotype | ||
+ | *Name server will handle the Genotype creating and issuing | ||
+ | *Name server is being rewritten so will be easier to use | ||
+ | *OA will be able to access the name server |
Latest revision as of 17:05, 19 April 2018
Agenda
1. WS266 schedule
- Proposed upload date - 18th May
2. Loading additional ontologies
- On the models list, we agreed to import the Relation Ontology (RO), which is needed for GO annotation, and could also be used elsewhere
- Are there other ontologies we should import? e.g. ECO?
3. SAB 2018/Project Meeting
- Assuming July 12/13 now confirmed
- Travel plans
- Hinxton will be flying in Weds night, and will be around for the whole of Thu/Fri (flying back at some point over the weekend)
4. Genotype class?
Minutes
1. Biological Ontologies Meeting (ICBO) at Oregon in August
- Raymond, Gary, Chris interested in going (to join phenotype ontology developers meeting at beginning)
- Would contribute to phenotype ontology workshop
2. WS266 upload
- Files are due May 15th to citace
- Tomorrow is the last day to propose changes to models
- Models will be released next week
3. Importing Ontologies into WormBase
- Will hold off till WS267 to import RO and ECO
- Will give us more time to think about all the models that may need changing
- Currently some curators using GO codes, GO codes could be automatically mapped to ECO codes
4. Project meeting and SAB 2018
- Thursday all day: project meeting, site presentations
- Thursday night dinner
- Friday morning-presentations Afternoon-SAB feedback
- Friday night dinner
Topics for discussion:
- Path to transition to Alliance and potential problems
- Focus on plans and priorities--curation priorities
Travel arrangements:
- Sibyl will send the accomodation code
- Caltech people: contact Sarah for travel arrangements
5. Genotype class
- Many MODs curate to the Genotype
- There is a practical use of introducing the Genotype class--sometimes authors do not give the names of strains, can represent the entire genetic entity that is the model for disease and/or exhibits the phenotype
- Name server will handle the Genotype creating and issuing
- Name server is being rewritten so will be easier to use
- OA will be able to access the name server