Difference between revisions of "WBConfCall 2017-11-16-Agenda and Minutes"
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** Matt R - Started like a simple issue, but grew more complicated. | ** Matt R - Started like a simple issue, but grew more complicated. | ||
** Chris - Can we use the models mailing list ? | ** Chris - Can we use the models mailing list ? | ||
+ | ** Todd - github should post to slack, maybe have discussion there. | ||
+ | ** Raymond - Caltech doesn't use slack much, prefers email. |
Revision as of 16:48, 16 November 2017
Agenda
Outstanding Help Desk
- https://github.com/WormBase/website/issues/5977
- Submitted 2 assembled genomes + annotations to NCBI (C. latens/PX534 and C.remanei/PX439
- would like to add the 2 new assemblies to WormBase and update the C.remanei/PX356 assembly & annotation to the new set.
Minutes
- Orthology. Something about PantherDB.
- Chris / Jae - Sequence similarity calls, and orthology calls by other methods. Can we take all things into account when displaying orthologs in AGR or WormBase.
- Michael P - We show all connections.
- Raymond - Not about automated predictions, about manual connections of functional homologs, not picked up by automated mechanisms.
- Paul S - Functional data is not orthology.
- Chris - AGR working on help desk pipeline.
- Raymond - Caltech scrambling for model changes recently. There was discussion on github, but Caltech didn't know, how does Caltech subscribe to these discussions ?
- Matt R - Started like a simple issue, but grew more complicated.
- Chris - Can we use the models mailing list ?
- Todd - github should post to slack, maybe have discussion there.
- Raymond - Caltech doesn't use slack much, prefers email.