Difference between revisions of "WBConfCall 2016.09.01-Agenda and Minutes"
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* Should we put the next build (WS256) on hold? Probably not. OICR won't need to start the working on WS256 for ~4 weeks | * Should we put the next build (WS256) on hold? Probably not. OICR won't need to start the working on WS256 for ~4 weeks | ||
* Sibyl could possibly attempt to stage WS256, Juancarlos could provide assistance | * Sibyl could possibly attempt to stage WS256, Juancarlos could provide assistance | ||
+ | |||
+ | == Working Groups == | ||
+ | |||
+ | === Use Cases === | ||
+ | |||
+ | === Disease/Phenotype === | ||
+ | * 2 meetings so far | ||
+ | * What objects do people curate to? | ||
+ | * What are the ontologies and controlled vocabularies that are used? | ||
+ | * There's a mixed bag; group will work on defining standards that everyone can use | ||
+ | * The Disease Ontology (DO) was decided to be a central ontology to use; some funding for DO in question | ||
+ | * Mouse group has been working heavily with DO and OMIM | ||
+ | * OMIM have their own curators and annotation style, not quite ready for receiving input from outside databases/groups | ||
+ | * Discussing curation of NOTs; when a disease model might be expected, capture when it doesn't turn out to be |
Revision as of 16:04, 1 September 2016
Contents
Agenda
Standing items
Updates from AGR working groups
- Use-case
- Disease / Phenotype
- Orthology
- Tools
Help Desk tickets requiring attention
- User asking about use of RESTful API; https://github.com/WormBase/website/issues/5069
Minutes
Todd
- Was in a car accident; will need to minimize work load and screen time (emergencies only for now)
- Should we put the next build (WS256) on hold? Probably not. OICR won't need to start the working on WS256 for ~4 weeks
- Sibyl could possibly attempt to stage WS256, Juancarlos could provide assistance
Working Groups
Use Cases
Disease/Phenotype
- 2 meetings so far
- What objects do people curate to?
- What are the ontologies and controlled vocabularies that are used?
- There's a mixed bag; group will work on defining standards that everyone can use
- The Disease Ontology (DO) was decided to be a central ontology to use; some funding for DO in question
- Mouse group has been working heavily with DO and OMIM
- OMIM have their own curators and annotation style, not quite ready for receiving input from outside databases/groups
- Discussing curation of NOTs; when a disease model might be expected, capture when it doesn't turn out to be