Difference between revisions of "WBConfCall 2012.05.17-Agenda and Minutes"
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RNAi clone mapping | RNAi clone mapping | ||
| − | * | + | *Some PCR_products have odd # oligos (> 2 or < 2) |
| − | * | + | *Some have oligos that do not map (because genome has changed) |
*How should we handle oligos that do not map? | *How should we handle oligos that do not map? | ||
**Will make model change to distinguish original primer submissions from ones used to map to genome | **Will make model change to distinguish original primer submissions from ones used to map to genome | ||
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Model change submissions | Model change submissions | ||
| − | *Due by next conference call ( | + | *Due by next conference call (June 7th) |
*Interaction model change in the works | *Interaction model change in the works | ||
Latest revision as of 16:55, 17 May 2012
Agenda
1. Life_stage model change
From Daniela,
Life_stage model change proposal:
?Life_stage Public_name UNIQUE Text
Is just adding the Public_name tag. We need this to store the Life_stage names after the name to ID switch.
2. RNAi clone mapping efforts
What is the current status of clone mapping efforts for RNAi objects at Hinxton?
PCR_product/DNA text mapping will be handed over as of next upload
Notes
Sporadic web erros
- May be due to web caching or may be due to server errors
- May be load dependent
Life_stage model change
- Add Public_name tag to accommodate switch to IDs as main identifier
RNAi clone mapping
- Some PCR_products have odd # oligos (> 2 or < 2)
- Some have oligos that do not map (because genome has changed)
- How should we handle oligos that do not map?
- Will make model change to distinguish original primer submissions from ones used to map to genome
Model change submissions
- Due by next conference call (June 7th)
- Interaction model change in the works
Source BioScience
- Relationship to WormBase? No
- Source BioScience claims they have fully sequenced Ahringer RNAi clones
- Could they give us the confirmed sequence?
- Raymond will send Paul Davis link to page that describes sequence verification
