Difference between revisions of "WBConfCall 2012.02.02-Agenda and Minutes"
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==== New Homology type nemNOG - Michael ==== | ==== New Homology type nemNOG - Michael ==== | ||
+ | <pre> | ||
+ | #Homology_type KOG | ||
+ | TWOG | ||
+ | FOG | ||
+ | LSE | ||
+ | NOG //eggNOG - standard cluster | ||
+ | euNOG //eggNOG - eukaryote cluster | ||
+ | meNOG //eggNOG - metazoan cluster | ||
+ | COG //eggNOG - COG cluster // MH6 WS228 | ||
+ | nemNOG //eggNOG - nematode clusters | ||
+ | </pre> | ||
==== Re-homing of Rescued_by_Transgene from Variation -> Phenotype_info - Karen ==== | ==== Re-homing of Rescued_by_Transgene from Variation -> Phenotype_info - Karen ==== |
Revision as of 11:43, 2 February 2012
Contents
- 1 Agenda and Minutes for the Conference Call 2nd February 2012
- 1.1 Agenda
- 1.1.1 ACeDB models
- 1.1.1.1 Unified Interaction model - Chris & Kimberly
- 1.1.1.2 Legacy data incorporation (Variation Phenotype_info) - Karen
- 1.1.1.3 New Homology type nemNOG - Michael
- 1.1.1.4 Re-homing of Rescued_by_Transgene from Variation -> Phenotype_info - Karen
- 1.1.1.5 Removal of Accession_number XREF from the Homology_group - Michael =
- 1.1.1.6 ?Transposon, Corresponding_CDS and Corresponding_Pseudogene - Paul =
- 1.1.1.7 Homology_group and Accession_number, removal of XREF between classes and some tags from Accession - Michael
- 1.1.1 ACeDB models
- 1.1 Agenda
Agenda and Minutes for the Conference Call 2nd February 2012
Agenda
ACeDB models
Unified Interaction model - Chris & Kimberly
Legacy data incorporation (Variation Phenotype_info) - Karen
//////////////////////////////////////////// // // ?Phenotype_info Class // //////////////////////////////////////////// #Phenotype_info add -> Ease_of_scoring UNIQUE ES0_Impossible_to_score ES1_Very_hard_to_score ES2_Difficult_to_score ES3_Easy_to_score //////////////////////////////////////////// // //Variation class // /////////////////////////////////////////// ?Variation Evidence #Evidence Genetics Gene_class ?Gene_class XREF Variation add -> Mating_efficiency Male UNIQUE ME0_Mating_not_successful ME1_Mating_rarely_successful ME2_Mating_usually_successful ME3_Mating_always_successful Hermaphrodite UNIQUE HE0_Mating_not_successful HE1_Mating_rarely_successful HE2_Mating_usually_successful HE3_Mating_always_successful
New Homology type nemNOG - Michael
#Homology_type KOG TWOG FOG LSE NOG //eggNOG - standard cluster euNOG //eggNOG - eukaryote cluster meNOG //eggNOG - metazoan cluster COG //eggNOG - COG cluster // MH6 WS228 nemNOG //eggNOG - nematode clusters