Difference between revisions of "Vulval development"
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[[http://www.wormbase.org/wiki/index.php/Process_Pages Processes index]] | [[http://www.wormbase.org/wiki/index.php/Process_Pages Processes index]] | ||
| − | = | + | =Vulval development in ''C. elegans''= |
| − | ==Signaling pathways | + | ==Signaling pathways== |
''(draw out in wikipathways, connect to reactome)''<br> | ''(draw out in wikipathways, connect to reactome)''<br> | ||
[WNT] | [WNT] | ||
| Line 9: | Line 9: | ||
[Notch] | [Notch] | ||
| − | == | + | ==Steps== |
[[Generation of VPC's]]<br> | [[Generation of VPC's]]<br> | ||
[[Vulval Precursor Patterning]] <br> | [[Vulval Precursor Patterning]] <br> | ||
| Line 20: | Line 20: | ||
[[Patterning of adult cell types: Polarity of 2° lineage]]<br> | [[Patterning of adult cell types: Polarity of 2° lineage]]<br> | ||
| − | ==Genes | + | ==Genes== |
| − | + | ''(from WBook chapter "Vulval development")''<br> | |
[http://www.wormbase.org/db/gene/gene?name=WBGene00000150;class=Gene apm-1], | [http://www.wormbase.org/db/gene/gene?name=WBGene00000150;class=Gene apm-1], | ||
[http://www.wormbase.org/db/gene/gene?name=WBGene00000168;class=Gene apx-1], | [http://www.wormbase.org/db/gene/gene?name=WBGene00000168;class=Gene apx-1], | ||
| Line 101: | Line 101: | ||
[http://www.wormbase.org/db/gene/gene?name=WBGene00023498;class=Gene lin-15A]<br> | [http://www.wormbase.org/db/gene/gene?name=WBGene00023498;class=Gene lin-15A]<br> | ||
| − | ==Cells | + | ==Cells== |
| − | [http://www.wormbase.org/db/cell/cell.cgi?name=P4.pa;class=Cell;open=citation#citation P4.pa], [http://www.wormbase.org/db/cell/cell.cgi?name=P8.p;class=Cell;open=citation#citation P8.p], [http://www.wormbase.org/db/cell/cell.cgi?name=P11;class=Cell;open=citation#citation P11], [http://www.wormbase.org/db/cell/cell.cgi?name=P6.p;class=Cell;open=citation#citation P6.p], [http://www.wormbase.org/db/cell/cell.cgi?name=P2.p;class=Cell;open=citation#citation P2.p], [http://www.wormbase.org/db/cell/cell.cgi?name=P8.pp;class=Cell;open=citation#citation P8.pp], [http://www.wormbase.org/db/cell/cell.cgi?name=P3.pa;class=Cell;open=citation#citation P3.pa], [http://www.wormbase.org/db/cell/cell.cgi?name=P1;class=Cell;open=citation#citation P1], [http://www.wormbase.org/db/cell/cell.cgi?name=G1;class=Cell;open=citation#citation G1], [http://www.wormbase.org/db/cell/cell.cgi?name=P1.p;class=Cell;open=citation#citation P1.p], [http://www.wormbase.org/db/cell/cell.cgi?name=P5.p;class=Cell;open=citation#citation P5.p], [http://www.wormbase.org/db/cell/cell.cgi?name=P4.p;class=Cell;open=citation#citation P4.p], [http://www.wormbase.org/db/cell/cell.cgi?name=P9.p;class=Cell;open=citation#citation P9.p], [http://www.wormbase.org/db/cell/cell.cgi?name=P4.pp;class=Cell;open=citation#citation P4.pp], [http://www.wormbase.org/db/cell/cell.cgi?name=P3.pp;class=Cell;open=citation#citation P3.pp], [http://www.wormbase.org/db/cell/cell.cgi?name=P8.pa;class=Cell;open=citation#citation ], [http://www.wormbase.org/db/cell/cell.cgi?name=P2;class=Cell;open=citation#citation P2], [http://www.wormbase.org/db/cell/cell.cgi?name=P7.p;class=Cell;open=citation#citation P7.p], [http://www.wormbase.org/db/cell/cell.cgi?name=P11.p;class=Cell;open=citation#citation P11.p], [http://www.wormbase.org/db/cell/cell.cgi?name=P3;class=Cell;open=citation#citation P3], [http://www.wormbase.org/db/cell/cell.cgi?name=P3.p;class=Cell;open=citation#citation P3.p]<br> | + | ''(from WBook chapter "Vulval development")''<br> |
| + | [http://www.wormbase.org/db/cell/cell.cgi?name=P4.pa;class=Cell;open=citation#citation P4.pa], | ||
| + | [http://www.wormbase.org/db/cell/cell.cgi?name=P8.p;class=Cell;open=citation#citation P8.p], | ||
| + | [http://www.wormbase.org/db/cell/cell.cgi?name=P11;class=Cell;open=citation#citation P11], | ||
| + | [http://www.wormbase.org/db/cell/cell.cgi?name=P6.p;class=Cell;open=citation#citation P6.p], | ||
| + | [http://www.wormbase.org/db/cell/cell.cgi?name=P2.p;class=Cell;open=citation#citation P2.p], | ||
| + | [http://www.wormbase.org/db/cell/cell.cgi?name=P8.pp;class=Cell;open=citation#citation P8.pp], | ||
| + | [http://www.wormbase.org/db/cell/cell.cgi?name=P3.pa;class=Cell;open=citation#citation P3.pa], | ||
| + | [http://www.wormbase.org/db/cell/cell.cgi?name=P1;class=Cell;open=citation#citation P1], | ||
| + | [http://www.wormbase.org/db/cell/cell.cgi?name=G1;class=Cell;open=citation#citation G1], | ||
| + | [http://www.wormbase.org/db/cell/cell.cgi?name=P1.p;class=Cell;open=citation#citation P1.p], | ||
| + | [http://www.wormbase.org/db/cell/cell.cgi?name=P5.p;class=Cell;open=citation#citation P5.p], | ||
| + | [http://www.wormbase.org/db/cell/cell.cgi?name=P4.p;class=Cell;open=citation#citation P4.p], | ||
| + | [http://www.wormbase.org/db/cell/cell.cgi?name=P9.p;class=Cell;open=citation#citation P9.p], | ||
| + | [http://www.wormbase.org/db/cell/cell.cgi?name=P4.pp;class=Cell;open=citation#citation P4.pp], | ||
| + | [http://www.wormbase.org/db/cell/cell.cgi?name=P3.pp;class=Cell;open=citation#citation P3.pp], | ||
| + | [http://www.wormbase.org/db/cell/cell.cgi?name=P8.pa;class=Cell;open=citation#citation P8.pa], | ||
| + | [http://www.wormbase.org/db/cell/cell.cgi?name=P2;class=Cell;open=citation#citation P2], | ||
| + | [http://www.wormbase.org/db/cell/cell.cgi?name=P7.p;class=Cell;open=citation#citation P7.p], | ||
| + | [http://www.wormbase.org/db/cell/cell.cgi?name=P11.p;class=Cell;open=citation#citation P11.p], | ||
| + | [http://www.wormbase.org/db/cell/cell.cgi?name=P3;class=Cell;open=citation#citation P3], | ||
| + | [http://www.wormbase.org/db/cell/cell.cgi?name=P3.p;class=Cell;open=citation#citation P3.p]<br> | ||
| + | |||
| + | ==Associated GO assignments== | ||
Revision as of 19:04, 30 May 2009
Contents
Vulval development in C. elegans
Signaling pathways
(draw out in wikipathways, connect to reactome)
[WNT]
[EGF]
[Notch]
Steps
Generation of VPC's
Vulval Precursor Patterning
Generation of the adult
Anchor cell invasion
Morphogenesis of the vulva
Generation of the anchor cell: AC/UV decision
Uterine patterning: pi cell induction
Uterine patterning: uv1 induction
Patterning of adult cell types: 1° lineage
Patterning of adult cell types: Polarity of 2° lineage
Genes
(from WBook chapter "Vulval development")
apm-1,
apx-1,
ark-1,
bam-2,
bar-1,
cdf-1,
ced-10,
ceh-20,
cki-1,
cog-1,
cye-1,
dig-1,
dpy-22,
dpy-23,
dsl-1,
eff-1,
efl-1,
egl-13,
egl-17,
egl-18,
egl-19,
egl-26,
egl-30,
egl-38,
elt-6,
evl-20,
gap-1,
gpa-5,
hda-1,
hsp-16.49,
ksr-1,
lag-2,
let-23,
let-60,
lin-1,
lin-3,
lin-4,
lin-11,
lin-12,
lin-14,
lin-17,
lin-18,
lin-25,
lin-28,
lin-29,
lin-31,
lin-35,
lin-39,
lin-44,
lip-1,
lst-1,
lst-2,
lst-3,
lst-4,
mab-5,
mdt-6,
mig-2,
par-1,
pop-1,
rom-1,
sem-4,
sli-1,
sqv-1,
sqv-2,
sqv-3,
sqv-4,
sqv-5,
sqv-6,
sqv-7,
sqv-8,
sra-13,
sur-2,
syg-1,
unc-62,
unc-101,
zmp-1,
syg-2,
lin-15A
Cells
(from WBook chapter "Vulval development")
P4.pa,
P8.p,
P11,
P6.p,
P2.p,
P8.pp,
P3.pa,
P1,
G1,
P1.p,
P5.p,
P4.p,
P9.p,
P4.pp,
P3.pp,
P8.pa,
P2,
P7.p,
P11.p,
P3,
P3.p
